RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 PCDHA9Q9Y5H5 950 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 GPR45Q9Y5Y3 372 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 SQORQ9Y6N5 450 aa15.17■□□□□ 0.02
DDX56-201ENST00000258772 CEP350Q5VT06 3117 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 FAM149AA5PLN7 773 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 CYBAP13498 195 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 PSMA4P25789 261 aaKnown RBP15.16■□□□□ 0.02
DDX56-201ENST00000258772 FMO4P31512 558 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 MAPKAPK2P49137 400 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 PLOD1Q02809 727 aaPredicted RBP15.16■□□□□ 0.02
DDX56-201ENST00000258772 DSC1Q08554 894 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 FBXO48Q5FWF7 155 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 ANKS6Q68DC2 871 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 EPHX4Q8IUS5 362 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 B4GALNT2Q8NHY0 566 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 DIS3LQ8TF46 1054 aaKnown RBP15.16■□□□□ 0.02
DDX56-201ENST00000258772 OLA1Q9NTK5 396 aaKnown RBP15.16■□□□□ 0.02
DDX56-201ENST00000258772 TAS2R13Q9NYV9 303 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 TIMM22Q9Y584 194 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 CHD5Q8TDI0 1954 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 LCHNA4D1U4 455 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 ARPC2O15144 300 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 NDST3O95803 873 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 IGLV3-27P01718 113 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 ASGR1P07306 291 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 FASP25445 335 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 FOXM1Q08050 763 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 TSNQ15631 228 aaKnown RBP15.16■□□□□ 0.02
DDX56-201ENST00000258772 LRRC23Q53EV4 343 aaPredicted RBP15.16■□□□□ 0.02
DDX56-201ENST00000258772 OGFOD2Q6N063 350 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 GLB1LQ6UWU2 654 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 TSPEARQ8WU66 669 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 ZNF599Q96NL3 588 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 TRIB3Q96RU7 358 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 PDFQ9HBH1 243 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 TIMMDC1Q9NPL8 285 aa15.16■□□□□ 0.02
DDX56-201ENST00000258772 NLE1Q9NVX2 485 aaPredicted RBP15.16■□□□□ 0.02
DDX56-201ENST00000258772 A0A1W2PP18 115 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 MOXD2PA6NHM9 499 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 ECI2O75521 394 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 CRCPO75575 148 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 SOAT2O75908 522 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 MAGEA11P43364 429 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 OR1G1P47890 313 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 CDK9P50750 372 aaKnown RBP15.15■□□□□ 0.02
DDX56-201ENST00000258772 TAF10Q12962 218 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 SPATS1Q496A3 300 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 VARS2Q5ST30 1063 aaKnown RBP15.15■□□□□ 0.02
DDX56-201ENST00000258772 ALG1LQ6GMV1 187 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 NADSYN1Q6IA69 706 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 COLGALT2Q8IYK4 626 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 CMTR2Q8IYT2 770 aaKnown RBP15.15■□□□□ 0.02
DDX56-201ENST00000258772 ADGRG5Q8IZF4 528 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 TMEM125Q96AQ2 219 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 CENPNQ96H22 339 aaPredicted RBP15.15■□□□□ 0.02
DDX56-201ENST00000258772 MYRFLQ96LU7 910 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 TRIM8Q9BZR9 551 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 TLR8Q9NR97 1041 aaKnown RBP15.15■□□□□ 0.02
DDX56-201ENST00000258772 SMOXQ9NWM0 555 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 PHF24Q9UPV7 400 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 PRG3Q9Y2Y8 225 aaPredicted RBP15.15■□□□□ 0.02
DDX56-201ENST00000258772 ACTL7AQ9Y615 435 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 A0A0D9SEW6 157 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 TMEM189-UBE2V1I3L0A0 370 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 CDC7O00311 574 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 TPST1O60507 370 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 BMP10O95393 424 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 CYBBP04839 570 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 RPS17P08708 135 aaKnown RBP15.15■□□□□ 0.02
DDX56-201ENST00000258772 GNAO1P09471 354 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 PRR35P0CG20 571 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 CDK4P11802 303 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 CTGFP29279 349 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 PRDX3P30048 256 aaKnown RBP15.15■□□□□ 0.02
DDX56-201ENST00000258772 OXTRP30559 389 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 APLP1P51693 650 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 CDH15P55291 814 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 RAD51Q06609 339 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 ACBD5Q5T8D3 534 aaPredicted RBP15.15■□□□□ 0.02
DDX56-201ENST00000258772 SPATA19Q7Z5L4 167 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 RTN4RL1Q86UN2 441 aaPredicted RBP15.15■□□□□ 0.02
DDX56-201ENST00000258772 TRPV3Q8NET8 790 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 DNAJB14Q8TBM8 379 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 VPS33AQ96AX1 596 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 TEX37Q96LM6 180 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 TRIM54Q9BYV2 358 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 CCDC68Q9H2F9 335 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 SPO11Q9Y5K1 396 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 OAS3Q9Y6K5 1087 aaKnown RBP15.15■□□□□ 0.02
DDX56-201ENST00000258772 VWA8A3KMH1 1905 aa15.15■□□□□ 0.02
DDX56-201ENST00000258772 RNF103-CHMP3A0A140T963 221 aa15.14■□□□□ 0.01
DDX56-201ENST00000258772 TACR2P21452 398 aa15.14■□□□□ 0.01
DDX56-201ENST00000258772 MYF6P23409 242 aa15.14■□□□□ 0.01
DDX56-201ENST00000258772 RPL10P27635 214 aaKnown RBP15.14■□□□□ 0.01
DDX56-201ENST00000258772 CCT8P50990 548 aa15.14■□□□□ 0.01
DDX56-201ENST00000258772 ZNF140P52738 457 aaPredicted RBP15.14■□□□□ 0.01
DDX56-201ENST00000258772 MERTKQ12866 999 aa15.14■□□□□ 0.01
DDX56-201ENST00000258772 GRIK2Q13002 908 aa15.14■□□□□ 0.01
DDX56-201ENST00000258772 CLLU1OSQ5K130 101 aa15.14■□□□□ 0.01
DDX56-201ENST00000258772 ERI1Q8IV48 349 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms