RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 GNA12Q03113 381 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 ATP13A4Q4VNC1 1196 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 RNF220Q5VTB9 566 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 MZT2AQ6P582 158 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 DNAJB7Q7Z6W7 309 aaPredicted RBP10.85□□□□□ -0.67
URB2-201ENST00000258243 CELF5Q8N6W0 485 aaKnown RBP10.85□□□□□ -0.67
URB2-201ENST00000258243 RAD9AQ99638 391 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 SLC6A15Q9H2J7 730 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 SEMA4BQ9NPR2 832 aaPredicted RBP10.85□□□□□ -0.67
URB2-201ENST00000258243 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.85□□□□□ -0.67
URB2-201ENST00000258243 KLQ9UEF7 1012 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 PRKAG3Q9UGI9 489 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 PHF11Q9UIL8 331 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 TELO2Q9Y4R8 837 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 NRXN3Q9Y4C0 1643 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 WNT7AO00755 349 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 CLOCKO15516 846 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 PSIP1O75475 530 aaKnown RBP10.85□□□□□ -0.67
URB2-201ENST00000258243 FGF18O76093 207 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 PBX3P40426 434 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 BLMHQ13867 455 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 C4orf46Q504U0 113 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 PDCD4Q53EL6 469 aaKnown RBP10.85□□□□□ -0.67
URB2-201ENST00000258243 CWF19L1Q69YN2 538 aaKnown RBP10.85□□□□□ -0.67
URB2-201ENST00000258243 RNF19BQ6ZMZ0 732 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 PEX5LQ8IYB4 626 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 CACTIN-AS1Q8N1I8 211 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 TMEM132CQ8N3T6 1108 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 ZSCAN18Q8TBC5 510 aaPredicted RBP10.85□□□□□ -0.67
URB2-201ENST00000258243 COL26A1Q96A83 441 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 VPS33AQ96AX1 596 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 CERS2Q96G23 380 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 SUSD3Q96L08 255 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 IL12RB2Q99665 862 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 KCTD14Q9BQ13 255 aaPredicted RBP10.85□□□□□ -0.67
URB2-201ENST00000258243 CHKBQ9Y259 395 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 KCNU1A8MYU2 1149 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 C9IYK1 514 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 MGRN1O60291 552 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 MT-CO1P00395 513 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 ENPEPQ07075 957 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 BNIP1Q12981 228 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 PRKG2Q13237 762 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 HDDC3Q8N4P3 179 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 TEX19Q8NA77 164 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 CPXM1Q96SM3 734 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 SEMA6AQ9H2E6 1030 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 TRIT1Q9H3H1 467 aaKnown RBP10.85□□□□□ -0.67
URB2-201ENST00000258243 LRRC19Q9H756 370 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 DZANK1Q9NVP4 752 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 KCTD5Q9NXV2 234 aa10.85□□□□□ -0.67
URB2-201ENST00000258243 BAZ2BQ9UIF8 2168 aaKnown RBP10.85□□□□□ -0.67
URB2-201ENST00000258243 DPPA5A6NC42 116 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 ABHD2P08910 425 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 FCGR1AP12314 374 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 ETS1P14921 441 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 ITGADQ13349 1161 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 SMCO1Q147U7 214 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 PFKFB4Q16877 469 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 ALG11Q2TAA5 492 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 XKR6Q5GH73 641 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 HMBOX1Q6NT76 420 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 ADAMTSL2Q86TH1 951 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 NRSN1Q8IZ57 195 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 KREMEN1Q96MU8 473 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 XPNPEP1Q9NQW7 623 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 VPS45Q9NRW7 570 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 CRNNQ9UBG3 495 aaPredicted RBP10.84□□□□□ -0.67
URB2-201ENST00000258243 PCDHGC3Q9UN70 934 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 A0A087WXM4 84 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 CCDC154A6NI56 674 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 F2P00734 622 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 SPAM1P38567 509 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 PTPN9P43378 593 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 DHPSP49366 369 aaPredicted RBP10.84□□□□□ -0.67
URB2-201ENST00000258243 MAPK10P53779 464 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 PKNOX1P55347 436 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 CRADDP78560 199 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 PDGFRLQ15198 375 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 CYP2R1Q6VVX0 501 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 RBM44Q6ZP01 1051 aaKnown RBP10.84□□□□□ -0.67
URB2-201ENST00000258243 IZUMO1Q8IYV9 350 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 SLC4A11Q8NBS3 891 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 ZNF384Q8TF68 577 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 KCTD15Q96SI1 283 aaPredicted RBP10.84□□□□□ -0.67
URB2-201ENST00000258243 AIFM2Q9BRQ8 373 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 ELOVL2Q9NXB9 296 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 MRPS33Q9Y291 106 aaKnown RBP10.84□□□□□ -0.67
URB2-201ENST00000258243 TPP1O14773 563 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 EDF1O60869 148 aaKnown RBP10.84□□□□□ -0.67
URB2-201ENST00000258243 SNAI1O95863 264 aaPredicted RBP10.84□□□□□ -0.67
URB2-201ENST00000258243 CFIP05156 583 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 THEGLP0DJG4 465 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 PABPC1P11940 636 aaKnown RBP10.84□□□□□ -0.67
URB2-201ENST00000258243 S100A3P33764 101 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 RPL22P35268 128 aaKnown RBP10.84□□□□□ -0.67
URB2-201ENST00000258243 PGDP52209 483 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 NRF1Q16656 503 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 LINGO4Q6UY18 593 aa10.84□□□□□ -0.67
URB2-201ENST00000258243 TAC4Q86UU9 113 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms