RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 CHKBQ9Y259 395 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 RUVBL1Q9Y265 456 aaKnown RBP13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 SLC9A8Q9Y2E8 581 aa13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 HEMK1Q9Y5R4 338 aaPredicted RBP13.36□□□□□ -0.27
PRPF38A-201ENST00000257181 MYO1GB0I1T2 1018 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 TGM5O43548 720 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 WDR47O94967 919 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 GJB6O95452 261 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 EN2P19622 333 aaPredicted RBP13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 TNFRSF8P28908 595 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 RFX3P48380 749 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 CCT8P50990 548 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 FRG1Q14331 258 aaKnown RBP13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 ZCWPW2Q504Y3 356 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 ARSIQ5FYB1 569 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 MPP7Q5T2T1 576 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 PHF19Q5T6S3 580 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 CNSTQ6PJW8 725 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 FAM92BQ6ZTR7 304 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 MMAAQ8IVH4 418 aaKnown RBP13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 CLIP3Q96DZ5 547 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 SGF29Q96ES7 293 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 HIC2Q96JB3 615 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 PTPN18Q99952 460 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 CDC42EP4Q9H3Q1 356 aaKnown RBP13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 NDUFAF1Q9Y375 327 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 WNT6Q9Y6F9 365 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 KCNH1O95259 989 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 PKNOX1P55347 436 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 ALDH6A1Q02252 535 aaKnown RBP13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 TMEM220Q6QAJ8 160 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 ADGRG2Q8IZP9 1017 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 RP9Q8TA86 221 aaKnown RBP13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 PIGKQ92643 395 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 NKD2Q969F2 451 aaPredicted RBP13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 LINGO1Q96FE5 620 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 POMKQ9H5K3 350 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 ANKRD36CQ5JPF3 1778 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 FAM234BA2RU67 622 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 PSMD11O00231 422 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 PEX10O60683 326 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 SLC29A2Q14542 456 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 LY6G5CQ5SRR4 150 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 SPATA19Q7Z5L4 167 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 ULK2Q8IYT8 1036 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 RFWD2Q8NHY2 731 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 SEMA4DQ92854 862 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 OR2M4Q96R27 311 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 PCYT2Q99447 389 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 EFCAB11Q9BUY7 163 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 PHF7Q9BWX1 381 aaPredicted RBP13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 BCAS3Q9H6U6 928 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 MYH2Q9UKX2 1941 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 CCDC154A6NI56 674 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 PGM1P36871 562 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 DHCR24Q15392 516 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 FAM153CQ494X1 144 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 ANO7Q6IWH7 933 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 AUTS2Q8WXX7 1259 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 MRM3Q9HC36 420 aaKnown RBP13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 SCHIP1Q9P0W5 487 aaPredicted RBP13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 PHF11Q9UIL8 331 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 FCF1Q9Y324 198 aaKnown RBP13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 ITGB4P16144 1822 aa13.35□□□□□ -0.27
PRPF38A-201ENST00000257181 CHN1P15882 459 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 JAM2P57087 298 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 POM121L1PQ3SYA9 428 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 TSTD2Q5T7W7 516 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 KIAA0930Q6ICG6 404 aaPredicted RBP13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 P3H2Q8IVL5 708 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 DEFB123Q8N688 67 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 OR7D4Q8NG98 312 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 TMEM125Q96AQ2 219 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 CASD1Q96PB1 797 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 FAM111AQ96PZ2 611 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 TRIB3Q96RU7 358 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 WDR24Q96S15 920 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 FAM118BQ9BPY3 351 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 RHBGQ9H310 441 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 LMAN1LQ9HAT1 526 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 PREBQ9HCU5 417 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 USP27XA6NNY8 438 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 PAPSS1O43252 624 aaPredicted RBP13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 EDN1P05305 212 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 TPP2P29144 1249 aaPredicted RBP13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 RABGGTBP53611 331 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 CCINQ13939 588 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 NAA30Q147X3 362 aaPredicted RBP13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 FAM133BQ5BKY9 247 aaKnown RBP13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 TJAP1Q5JTD0 557 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 N4BP2L1Q5TBK1 243 aaPredicted RBP13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 LIX1Q8N485 282 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 SMPDL3AQ92484 453 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 C12orf66Q96MD2 445 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 WRAP53Q9BUR4 548 aaKnown RBP13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 RACGAP1Q9H0H5 632 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 IMPAD1Q9NX62 359 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 TRIM10Q9UDY6 481 aa13.34□□□□□ -0.27
PRPF38A-201ENST00000257181 TOGARAM1Q9Y4F4 1720 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms