RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 ARMC2Q8NEN0 867 aa9.4□□□□□ -0.9
NIP7-202ENST00000254941 ZNF398Q8TD17 642 aa9.4□□□□□ -0.9
NIP7-202ENST00000254941 DTX3LQ8TDB6 740 aa9.4□□□□□ -0.9
NIP7-202ENST00000254941 ARRDC3Q96B67 414 aa9.4□□□□□ -0.9
NIP7-202ENST00000254941 CHMP6Q96FZ7 201 aa9.4□□□□□ -0.9
NIP7-202ENST00000254941 BIRC8Q96P09 236 aa9.4□□□□□ -0.9
NIP7-202ENST00000254941 TTC1Q99614 292 aa9.4□□□□□ -0.9
NIP7-202ENST00000254941 AARSD1Q9BTE6 412 aaKnown RBP9.4□□□□□ -0.9
NIP7-202ENST00000254941 CDH19Q9H159 772 aa9.4□□□□□ -0.9
NIP7-202ENST00000254941 RSPH9Q9H1X1 276 aaPredicted RBP9.4□□□□□ -0.9
NIP7-202ENST00000254941 ZNF358Q9NW07 568 aa9.4□□□□□ -0.9
NIP7-202ENST00000254941 PKD2L2Q9NZM6 624 aa9.4□□□□□ -0.9
NIP7-202ENST00000254941 TMEM216Q9P0N5 145 aa9.4□□□□□ -0.9
NIP7-202ENST00000254941 NFKBIL1Q9UBC1 381 aaPredicted RBP9.4□□□□□ -0.9
NIP7-202ENST00000254941 NUMA1Q14980 2115 aa9.4□□□□□ -0.9
NIP7-202ENST00000254941 A0A087X1B8 175 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 RGSL1A5PLK6 1076 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 PSMD11O00231 422 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 SPINT1O43278 529 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 OR1I1O60431 355 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 PLIN3O60664 434 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 EGFP01133 1207 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 PROCP04070 461 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 ADRB3P13945 408 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 CD9P21926 228 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 FDXRP22570 491 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 NTSR1P30989 418 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 SLC26A3P40879 764 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 WASP42768 502 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 SEC13P55735 322 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 TIAL1Q01085 375 aaKnown RBP eCLIP9.4□□□□□ -0.91
NIP7-202ENST00000254941 SATB1Q01826 763 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 ELP6Q0PNE2 266 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 GRSF1Q12849 480 aaKnown RBP eCLIP9.4□□□□□ -0.91
NIP7-202ENST00000254941 CCDC153Q494R4 210 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 LYPLAL1Q5VWZ2 237 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 PTCRAQ6ISU1 281 aaPredicted RBP9.4□□□□□ -0.91
NIP7-202ENST00000254941 C16orf46Q6P387 395 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 RFLNAQ6ZTI6 216 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 ERN2Q76MJ5 926 aaKnown RBP9.4□□□□□ -0.91
NIP7-202ENST00000254941 HSD11B1LQ7Z5J1 315 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 SERPINA9Q86WD7 417 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 IL17RCQ8NAC3 791 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 RAB7BQ96AH8 199 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 MSANTD3Q96H12 275 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 UBXN10Q96LJ8 280 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 GABRG3Q99928 467 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 HDAC8Q9BY41 377 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 CCDC68Q9H2F9 335 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 POPDC3Q9HBV1 291 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 DYRK4Q9NR20 520 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 RAD18Q9NS91 495 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 MED16Q9Y2X0 877 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 COMMD10Q9Y6G5 202 aa9.4□□□□□ -0.91
NIP7-202ENST00000254941 TCP11X1B4DZS4 312 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 PRMT5O14744 637 aaPredicted RBP9.39□□□□□ -0.91
NIP7-202ENST00000254941 BIRC5O15392 142 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 NARSO43776 548 aaKnown RBP9.39□□□□□ -0.91
NIP7-202ENST00000254941 SYNCRIPO60506 623 aaKnown RBP9.39□□□□□ -0.91
NIP7-202ENST00000254941 KLHL2O95198 593 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 ESR1P03372 595 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 ELFN1P0C7U0 828 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 SRFP11831 508 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 UGT1A6P19224 532 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 TAC1P20366 129 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 UGT1A1P22309 533 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 UGT1A4P22310 534 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 ACRV1P26436 265 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 FMO4P31512 558 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 UGT1A3P35503 534 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 UGT1A5P35504 534 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 P2RY2P41231 377 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 PSMD8P48556 350 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 ITGA9Q13797 1035 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 CST6Q15828 149 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 DBN1Q16643 649 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 TSNAXIP1Q2TAA8 658 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 ATP13A5Q4VNC0 1218 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 C2orf27AQ580R0 203 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 HENMT1Q5T8I9 393 aaKnown RBP9.39□□□□□ -0.91
NIP7-202ENST00000254941 SDE2Q6IQ49 451 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 Q6ZVL8 140 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 TECPR1Q7Z6L1 1165 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 TBC1D1Q86TI0 1168 aaPredicted RBP9.39□□□□□ -0.91
NIP7-202ENST00000254941 RBFAQ8N0V3 343 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 NXPE1Q8N323 547 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 GPR78Q96P69 363 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 P2RY12Q9H244 342 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 NMRAL1Q9HBL8 299 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 GPAMQ9HCL2 828 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 SLC2A4RGQ9NR83 387 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 TAS2R13Q9NYV9 303 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 ITM2BQ9Y287 266 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 PCDHB1Q9Y5F3 818 aa9.39□□□□□ -0.91
NIP7-202ENST00000254941 WDR91A4D1P6 747 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 SHISA7A6NL88 538 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 RNASEH1O60930 286 aaKnown RBP9.38□□□□□ -0.91
NIP7-202ENST00000254941 DNAJC6O75061 913 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 ADAM23O75077 832 aa9.38□□□□□ -0.91
NIP7-202ENST00000254941 FAM107AO95990 144 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms