RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 HNRNPRO43390 633 aaKnown RBP21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 TLR5O60602 858 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 VPS4BO75351 444 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 VNN2O95498 520 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 FGFR3P22607 806 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 ATP6V0D1P61421 351 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 GNA12Q03113 381 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 VPS26BQ4G0F5 336 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 AMIGO2Q86SJ2 522 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 CARM1Q86X55 608 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 TUBGCP3Q96CW5 907 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 SEPT5Q99719 369 aaPredicted RBP21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 GRIP2Q9C0E4 1043 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 FXYD1O00168 92 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 ANGPT2O15123 496 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 RPS17P08708 135 aaKnown RBP21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 HSD17B1P14061 328 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 ATP6V1B1P15313 513 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 PSMA3P25788 255 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 KCNQ1P51787 676 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 COQ5Q5HYK3 327 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 OR7D4Q8NG98 312 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 NMD3Q96D46 503 aaKnown RBP21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 B3GALT6Q96L58 329 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 NSMCE3Q96MG7 304 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 PSKH2Q96QS6 385 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 SLC29A1Q99808 456 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 GPR62Q9BZJ7 368 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 IKZF3Q9UKT9 509 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 ACTL7AQ9Y615 435 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 AQP12BA6NM10 295 aa21.52■■□□□ 1.04
SH2D3A-201ENST00000245908 BMP2P12643 396 aa21.52■■□□□ 1.04
SH2D3A-201ENST00000245908 HGFP14210 728 aa21.52■■□□□ 1.04
SH2D3A-201ENST00000245908 FMO4P31512 558 aa21.52■■□□□ 1.04
SH2D3A-201ENST00000245908 SLC6A4P31645 630 aa21.52■■□□□ 1.04
SH2D3A-201ENST00000245908 GRIA3P42263 894 aa21.52■■□□□ 1.04
SH2D3A-201ENST00000245908 PRKCZQ05513 592 aa21.52■■□□□ 1.04
SH2D3A-201ENST00000245908 RAD51Q06609 339 aa21.52■■□□□ 1.04
SH2D3A-201ENST00000245908 GPR17Q13304 367 aa21.52■■□□□ 1.04
SH2D3A-201ENST00000245908 ADRM1Q16186 407 aa21.52■■□□□ 1.04
SH2D3A-201ENST00000245908 ERMP1Q7Z2K6 904 aa21.52■■□□□ 1.04
SH2D3A-201ENST00000245908 AQP12AQ8IXF9 295 aa21.52■■□□□ 1.04
SH2D3A-201ENST00000245908 CANT1Q8WVQ1 401 aa21.52■■□□□ 1.04
SH2D3A-201ENST00000245908 PPP1R14BQ96C90 147 aa21.52■■□□□ 1.04
SH2D3A-201ENST00000245908 TCF12Q99081 682 aa21.52■■□□□ 1.04
SH2D3A-201ENST00000245908 CIB1Q99828 191 aa21.52■■□□□ 1.04
SH2D3A-201ENST00000245908 RETREG1Q9H6L5 497 aa21.52■■□□□ 1.04
SH2D3A-201ENST00000245908 NOL11Q9H8H0 719 aaKnown RBP21.52■■□□□ 1.04
SH2D3A-201ENST00000245908 PFDN1O60925 122 aa21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 ECI2O75521 394 aa21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 TIPRLO75663 272 aa21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 LINC00032P0C843 101 aa21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 IDO1P14902 403 aa21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 TPP2P29144 1249 aaPredicted RBP21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 HPCAP84074 193 aa21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 TAF1AQ15573 450 aaPredicted RBP21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 MYLK3Q32MK0 819 aa21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 ANKS6Q68DC2 871 aa21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 OGFOD2Q6N063 350 aa21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 RNF19BQ6ZMZ0 732 aa21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 SLC15A3Q8IY34 581 aa21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 OR4K2Q8NGD2 314 aa21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 CINPQ9BW66 212 aaPredicted RBP21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 TRIM15Q9C019 465 aa21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 CCDC68Q9H2F9 335 aa21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 IL1RL2Q9HB29 575 aa21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 SLC52A3Q9NQ40 469 aa21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 CCM2LQ9NUG4 571 aaPredicted RBP21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 GID8Q9NWU2 228 aa21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 FAM50BQ9Y247 325 aa21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 BTRCQ9Y297 605 aa21.52■■□□□ 1.03
SH2D3A-201ENST00000245908 THSD7BQ9C0I4 1608 aa21.51■■□□□ 1.03
SH2D3A-201ENST00000245908 A0A1B0GTL3 188 aa21.51■■□□□ 1.03
SH2D3A-201ENST00000245908 ACSL4O60488 711 aa21.51■■□□□ 1.03
SH2D3A-201ENST00000245908 RGRP47804 291 aa21.51■■□□□ 1.03
SH2D3A-201ENST00000245908 NR1H2P55055 460 aa21.51■■□□□ 1.03
SH2D3A-201ENST00000245908 NAA20P61599 178 aa21.51■■□□□ 1.03
SH2D3A-201ENST00000245908 FOXM1Q08050 763 aa21.51■■□□□ 1.03
SH2D3A-201ENST00000245908 BNIP2Q12982 314 aa21.51■■□□□ 1.03
SH2D3A-201ENST00000245908 KLHDC10Q6PID8 442 aa21.51■■□□□ 1.03
SH2D3A-201ENST00000245908 SAPCD2Q86UD0 394 aa21.51■■□□□ 1.03
SH2D3A-201ENST00000245908 C1QTNF3Q9BXJ4 246 aa21.51■■□□□ 1.03
SH2D3A-201ENST00000245908 UBA2Q9UBT2 640 aaPredicted RBP21.51■■□□□ 1.03
SH2D3A-201ENST00000245908 DMTF1Q9Y222 760 aa21.51■■□□□ 1.03
SH2D3A-201ENST00000245908 OAS3Q9Y6K5 1087 aaKnown RBP21.51■■□□□ 1.03
SH2D3A-201ENST00000245908 SYCE1LA8MT33 242 aa21.5■■□□□ 1.03
SH2D3A-201ENST00000245908 PRR35P0CG20 571 aa21.5■■□□□ 1.03
SH2D3A-201ENST00000245908 MRPL19P49406 292 aaKnown RBP21.5■■□□□ 1.03
SH2D3A-201ENST00000245908 TSNQ15631 228 aaKnown RBP21.5■■□□□ 1.03
SH2D3A-201ENST00000245908 IL31Q6EBC2 164 aa21.5■■□□□ 1.03
SH2D3A-201ENST00000245908 PPP4R4Q6NUP7 873 aa21.5■■□□□ 1.03
SH2D3A-201ENST00000245908 BORAQ6PGQ7 559 aa21.5■■□□□ 1.03
SH2D3A-201ENST00000245908 BLOC1S3Q6QNY0 202 aa21.5■■□□□ 1.03
SH2D3A-201ENST00000245908 RSPO2Q6UXX9 243 aaPredicted RBP21.5■■□□□ 1.03
SH2D3A-201ENST00000245908 B3GNT6Q6ZMB0 384 aa21.5■■□□□ 1.03
SH2D3A-201ENST00000245908 GLT6D1Q7Z4J2 308 aa21.5■■□□□ 1.03
SH2D3A-201ENST00000245908 GOLM1Q8NBJ4 401 aa21.5■■□□□ 1.03
SH2D3A-201ENST00000245908 TSPEARQ8WU66 669 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms