RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 SYTL2Q9HCH5 934 aa18.62■□□□□ 0.57
TNFSF9-201ENST00000245817 SIRPGQ9P1W8 387 aa18.62■□□□□ 0.57
TNFSF9-201ENST00000245817 SARDHQ9UL12 918 aa18.62■□□□□ 0.57
TNFSF9-201ENST00000245817 PCDHB1Q9Y5F3 818 aa18.62■□□□□ 0.57
TNFSF9-201ENST00000245817 STON1Q9Y6Q2 735 aa18.62■□□□□ 0.57
TNFSF9-201ENST00000245817 E5RI56 91 aa18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 PRMT5O14744 637 aaPredicted RBP18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 KLF11O14901 512 aa18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 MBTPS2O43462 519 aa18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 OR1I1O60431 355 aa18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 RNASEH1O60930 286 aaKnown RBP18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 VPS26AO75436 327 aa18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 ESR1P03372 595 aa18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 C1SP09871 688 aa18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 MYL2P10916 166 aa18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 ALDH3A1P30838 453 aa18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 GLRBP48167 497 aa18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 ELP6Q0PNE2 266 aa18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 UGT3A1Q6NUS8 523 aa18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 DPPA4Q7L190 304 aa18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 PARS2Q7L3T8 475 aaKnown RBP18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 CACNA2D3Q8IZS8 1091 aa18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 CENPLQ8N0S6 344 aaPredicted RBP18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 ULK4Q96C45 1275 aa18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 TSSK1BQ9BXA7 367 aa18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 PRSS16Q9NQE7 514 aa18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 LIMD1Q9UGP4 676 aa18.61■□□□□ 0.57
TNFSF9-201ENST00000245817 SPECC1L-ADORA2AF8WAN1 911 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 EBAG9O00559 213 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 GAPDHSO14556 408 aaPredicted RBP18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 SYNCRIPO60506 623 aaKnown RBP18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 EDF1O60869 148 aaKnown RBP18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 ELFN1P0C7U0 828 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 UGT1A6P19224 532 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 CHRM3P20309 590 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 UGT1A1P22309 533 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 UGT1A4P22310 534 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 KCNA4P22459 653 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 ACRV1P26436 265 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 UGT1A3P35503 534 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 UGT1A5P35504 534 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 SUOXP51687 545 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 PUS10Q3MIT2 529 aaKnown RBP18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 SDE2Q6IQ49 451 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 MMAAQ8IVH4 418 aaKnown RBP18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 FSTL5Q8N475 847 aaPredicted RBP18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 SPATA6LQ8N4H0 392 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 SEC16BQ96JE7 1060 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 ACOX2Q99424 681 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 MRPL57Q9BQC6 102 aaKnown RBP18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 CDH19Q9H159 772 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 C8orf33Q9H7E9 229 aaPredicted RBP18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 FBRSL1Q9HCM7 1045 aaKnown RBP18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 SLCO1B3Q9NPD5 702 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 ZDHHC4Q9NPG8 344 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 TRPV5Q9NQA5 729 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 PRDM6Q9NQX0 595 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 CPSF2Q9P2I0 782 aaKnown RBP18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 FAM50BQ9Y247 325 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 DENND4AQ7Z401 1863 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 NEMP1O14524 444 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 RBP1P09455 135 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 TIE1P35590 1138 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 SKIV2L2P42285 1042 aaKnown RBP18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 SEC13P55735 322 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 STX3Q13277 289 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 PCLAFQ15004 111 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 ACAP2Q15057 778 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 PTRHD1Q6GMV3 140 aaKnown RBP18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 PIGWQ7Z7B1 504 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 PIM3Q86V86 326 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 C10orf107Q8IVU9 208 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 CCDC197Q8NCU1 140 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 HEXDCQ8WVB3 486 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 BIRC8Q96P09 236 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 SPATA16Q9BXB7 569 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 MRPL46Q9H2W6 279 aaKnown RBP18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 FAM83DQ9H4H8 585 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 KCNK12Q9HB15 430 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 TRMT6Q9UJA5 497 aaKnown RBP18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 GNPTGQ9UJJ9 305 aa18.6■□□□□ 0.57
TNFSF9-201ENST00000245817 TRBV5-4A0A0C4DH59 114 aa18.59■□□□□ 0.57
TNFSF9-201ENST00000245817 RGSL1A5PLK6 1076 aa18.59■□□□□ 0.57
TNFSF9-201ENST00000245817 H3BMM5 538 aa18.59■□□□□ 0.57
TNFSF9-201ENST00000245817 GPR39O43194 453 aa18.59■□□□□ 0.57
TNFSF9-201ENST00000245817 TROVE2P10155 538 aaKnown RBP eCLIP18.59■□□□□ 0.57
TNFSF9-201ENST00000245817 RALBP11234 206 aa18.59■□□□□ 0.57
TNFSF9-201ENST00000245817 GRK2P25098 689 aa18.59■□□□□ 0.57
TNFSF9-201ENST00000245817 CTHP32929 405 aa18.59■□□□□ 0.57
TNFSF9-201ENST00000245817 MMP12P39900 470 aa18.59■□□□□ 0.57
TNFSF9-201ENST00000245817 WASP42768 502 aa18.59■□□□□ 0.57
TNFSF9-201ENST00000245817 PSMD8P48556 350 aa18.59■□□□□ 0.57
TNFSF9-201ENST00000245817 TFF2Q03403 129 aa18.59■□□□□ 0.57
TNFSF9-201ENST00000245817 SPATA21Q7Z572 469 aa18.59■□□□□ 0.57
TNFSF9-201ENST00000245817 RALGPS2Q86X27 583 aaPredicted RBP18.59■□□□□ 0.57
TNFSF9-201ENST00000245817 NXPE1Q8N323 547 aa18.59■□□□□ 0.57
TNFSF9-201ENST00000245817 KCNJ9Q92806 393 aa18.59■□□□□ 0.57
TNFSF9-201ENST00000245817 ARRDC3Q96B67 414 aa18.59■□□□□ 0.57
TNFSF9-201ENST00000245817 FAM136AQ96C01 138 aa18.59■□□□□ 0.57
TNFSF9-201ENST00000245817 UBXN10Q96LJ8 280 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms