RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 LRRC52Q8N7C0 313 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 ZNF607Q96SK3 696 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 GPR21Q99679 349 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 C1QTNF7Q9BXJ2 289 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 LRTM1Q9HBL6 345 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 ASF1AQ9Y294 204 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 ISM1B1AKI9 464 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 ZW10O43264 779 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 OMPP47874 163 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 CXCR3P49682 368 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 CCL23P55773 120 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 SMAD3P84022 425 aaKnown RBP13.32□□□□□ -0.28
NEK4-201ENST00000233027 IL18Q14116 193 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 FAM171BQ6P995 826 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 THAP5Q7Z6K1 395 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 COX4I2Q96KJ9 171 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 CCDC28BQ9BUN5 200 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 TTYH3Q9C0H2 523 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 SDCBP2Q9H190 292 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 RPRD1BQ9NQG5 326 aaKnown RBP13.32□□□□□ -0.28
NEK4-201ENST00000233027 E9PAM4 449 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 UGT1A9O60656 530 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 SERPINA1P01009 418 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 ADRA1BP35368 520 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 TMPRSS11BQ86T26 416 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 CPNE8Q86YQ8 564 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 RAVER1Q8IY67 606 aaKnown RBP13.32□□□□□ -0.28
NEK4-201ENST00000233027 ZNF567Q8N184 647 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 CXorf40BQ96DE9 158 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 FCRL4Q96PJ5 515 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 HBEGFQ99075 208 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 ALG2Q9H553 416 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 UGT1A7Q9HAW7 530 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 UGT1A10Q9HAW8 530 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 UGT1A8Q9HAW9 530 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 INTS7Q9NVH2 962 aaKnown RBP13.32□□□□□ -0.28
NEK4-201ENST00000233027 GMIPQ9P107 970 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 GMFGO60234 142 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 SERPINB7O75635 380 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 TRMUO75648 421 aaKnown RBP13.32□□□□□ -0.28
NEK4-201ENST00000233027 UGT2B17O75795 530 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 RPL9P32969 192 aaKnown RBP13.32□□□□□ -0.28
NEK4-201ENST00000233027 CAPGP40121 348 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 BRMS1LQ5PSV4 323 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 DCLRE1AQ6PJP8 1040 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 OR10G6Q8NH81 332 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 C1GALT1C1Q96EU7 318 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 AGAP2Q99490 1192 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 COPS8Q99627 209 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 ELL3Q9HB65 397 aaPredicted RBP13.32□□□□□ -0.28
NEK4-201ENST00000233027 LGALS13Q9UHV8 139 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 GSAPA4D1B5 854 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 E7ENX8 843 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 METTL18O95568 372 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 FABP3P05413 133 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 AMD1P17707 334 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 IKBKEQ14164 716 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 C15orf52Q6ZUT6 534 aaKnown RBP13.32□□□□□ -0.28
NEK4-201ENST00000233027 DPF3Q92784 378 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 TP53INP1Q96A56 240 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 ASAH2Q9NR71 780 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 FAM105AQ9NUU6 356 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 PLK2Q9NYY3 685 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 GRHL1Q9NZI5 618 aa13.32□□□□□ -0.28
NEK4-201ENST00000233027 AP2A2O94973 939 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 THRBP10828 461 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 MAPK8P45983 427 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 AIF1P55008 147 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 BHLHB9Q6PI77 547 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 CIR1Q86X95 450 aaPredicted RBP13.31□□□□□ -0.28
NEK4-201ENST00000233027 KLHL32Q96NJ5 620 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 RHOBTB2Q9BYZ6 727 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 SLC39A8Q9C0K1 460 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 ACSL4O60488 711 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 FSTL4Q6MZW2 842 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 CXorf57Q6NSI4 855 aaKnown RBP13.31□□□□□ -0.28
NEK4-201ENST00000233027 SERPINA13PQ6UXR4 307 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 RBM4BQ9BQ04 359 aaKnown RBP13.31□□□□□ -0.28
NEK4-201ENST00000233027 RBM4Q9BWF3 364 aaKnown RBP13.31□□□□□ -0.28
NEK4-201ENST00000233027 SLC35C2Q9NQQ7 365 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 RAPGEFL1Q9UHV5 662 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 MAP4K5Q9Y4K4 846 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 GPC6Q9Y625 555 aaPredicted RBP13.31□□□□□ -0.28
NEK4-201ENST00000233027 ZNF780BQ9Y6R6 833 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 TULP2O00295 520 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 AP2A1O95782 977 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 CSH1P0DML2 217 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 CSH2P0DML3 217 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 YAP1P46937 504 aaKnown RBP13.31□□□□□ -0.28
NEK4-201ENST00000233027 ARF5P84085 180 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 IL23RQ5VWK5 629 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 PEG10Q86TG7 708 aaKnown RBP13.31□□□□□ -0.28
NEK4-201ENST00000233027 CD84Q9UIB8 345 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 AJAP1Q9UKB5 411 aaPredicted RBP13.31□□□□□ -0.28
NEK4-201ENST00000233027 KCNE2Q9Y6J6 123 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 FAM92AA1XBS5 289 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 RGS10O43665 173 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 B4GALT4O60513 344 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 ALOX5P09917 674 aa13.31□□□□□ -0.28
NEK4-201ENST00000233027 STARP49675 285 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms