RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 DUSP6Q16828 381 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 ZRANB3Q5FWF4 1079 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 ARMC12Q5T9G4 340 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 SPNS2Q8IVW8 549 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 MRPL38Q96DV4 380 aaKnown RBP11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 TBATAQ96M53 351 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 GDF15Q99988 308 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 NSUN3Q9H649 340 aaKnown RBP11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 CAB39LQ9H9S4 337 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 SARS2Q9NP81 518 aaKnown RBP11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 DEC1Q9P2X7 70 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 SDK1Q7Z5N4 2213 aa11.68□□□□□ -0.54
TNFAIP1-201ENST00000226225 C2orf81A6NN90 581 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 SPRP35270 261 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 DGKGP49619 791 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 CDKL1Q00532 357 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 PITRM1Q5JRX3 1037 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 TMEM198Q66K66 360 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 NEPROQ6NW34 567 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 POTEHQ6S545 545 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 SH2D5Q6ZV89 423 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 MAVSQ7Z434 540 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 NPAS3Q8IXF0 933 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 PQLC1Q8N2U9 271 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 FBXW8Q8N3Y1 598 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 DCAF4L2Q8NA75 395 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 SMARCD2Q92925 531 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 ACDQ96AP0 544 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 GTSE1Q9NYZ3 720 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 ADA2Q9NZK5 511 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 KNL1Q8NG31 2342 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 CHD9Q3L8U1 2897 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 ZBTB14O43829 449 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 DNAJA2O60884 412 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 ADH1CP00326 375 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 ALPIP09923 528 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 XRCC1P18887 633 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 EPHA3P29320 983 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 DHCR24Q15392 516 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 SLC9B1Q4ZJI4 515 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 MBLAC2Q68D91 279 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 ADGRG2Q8IZP9 1017 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 OR13C4Q8NGS5 318 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 RIN3Q8TB24 985 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 EME1Q96AY2 570 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 ELMO2Q96JJ3 720 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 Q9H521 79 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 SIRPGQ9P1W8 387 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 KPNA3O00505 521 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 MOSPD3O75425 235 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 KLHL2O95198 593 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 NDST3O95803 873 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 OLFM2O95897 454 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 ADH5P11766 374 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 COX4I1P13073 169 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 SLC5A2P31639 672 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 GP5P40197 560 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 MYBPC1Q00872 1141 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 TEDDM1Q5T9Z0 273 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 LAYNQ6UX15 382 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 ZNF781Q8N8C0 355 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 OR4K2Q8NGD2 314 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 ARRDC2Q8TBH0 407 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 NCSTNQ92542 709 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 PPWD1Q96BP3 646 aaKnown RBP11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 CMTM5Q96DZ9 223 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 CATSPER2Q96P56 530 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 PTTG2Q9NZH5 202 aa11.67□□□□□ -0.54
TNFAIP1-201ENST00000226225 HMX2A2RU54 273 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 PHGDHO43175 533 aaKnown RBP11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 ATP5BP06576 529 aaKnown RBP11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 GDI1P31150 447 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 HOXA9P31269 272 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 ARRB2P32121 409 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 MAGEA6P43360 314 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 THOP1P52888 689 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 SNRPD1P62314 119 aaKnown RBP11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 ECT2LQ008S8 904 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 AFMIDQ63HM1 303 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 KLC3Q6P597 504 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 RANBP10Q6VN20 620 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 PACS1Q6VY07 963 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 Q6ZNB5 142 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 ZNF599Q96NL3 588 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 OR52B2Q96RD2 323 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 FAM96AQ9H5X1 160 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 TMEM216Q9P0N5 145 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 TCAF1Q9Y4C2 921 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 PRUNE2Q8WUY3 3088 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 TRMUO75648 421 aaKnown RBP11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 PEX11BO96011 259 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 HLA-DPA1P20036 260 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 GLRBP48167 497 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 MPP1Q00013 466 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 FNDC3BQ53EP0 1204 aaKnown RBP11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 KCTD11Q693B1 232 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 TANGO2Q6ICL3 276 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 AAGABQ6PD74 315 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 CYP2R1Q6VVX0 501 aa11.66□□□□□ -0.54
TNFAIP1-201ENST00000226225 MYO1HQ8N1T3 1032 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms