RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PXDNQ92626 1479 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 TREHO43280 583 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 PIAS1O75925 651 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 AQP1P29972 269 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 FMO1Q01740 532 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 BNIP2Q12982 314 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 EEF1DP3Q658K8 133 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 OR5T3Q8NGG3 340 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 KLK6Q92876 244 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 CRELD1Q96HD1 420 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 FEM1CQ96JP0 617 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 IL12RB2Q99665 862 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 TAPBPLQ9BX59 468 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 SEC14L3Q9UDX4 400 aa13.19□□□□□ -0.3
COL1A1-201ENST00000225964 CYP3A7-CYP3A51PA0A087WV96 503 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 OR2AG2A6NM03 316 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 PTPN2P17706 415 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 TACR2P21452 398 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 CYP3A7P24462 503 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 AVPR1BP47901 424 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 CAP1Q01518 475 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 MYBPC3Q14896 1274 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 SLC24A5Q71RS6 500 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 CIR1Q86X95 450 aaPredicted RBP13.18□□□□□ -0.3
COL1A1-201ENST00000225964 HID1Q8IV36 788 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 PRSS58Q8IYP2 241 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 BAP1Q92560 729 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 FATE1Q969F0 183 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 ACE2Q9BYF1 805 aaPredicted RBP13.18□□□□□ -0.3
COL1A1-201ENST00000225964 NMUR1Q9HB89 426 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 ADGRE2Q9UHX3 823 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 DISP2A7MBM2 1401 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 LMTK2Q8IWU2 1503 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 ARHGAP23Q9P227 1491 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 OR1F1O43749 312 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 TMCC2O75069 709 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 CXorf57Q6NSI4 855 aaKnown RBP13.18□□□□□ -0.3
COL1A1-201ENST00000225964 ILDR1Q86SU0 546 aaPredicted RBP13.18□□□□□ -0.3
COL1A1-201ENST00000225964 C12orf56Q8IXR9 622 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 UNC5BQ8IZJ1 945 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 AP3S1Q92572 193 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 B3GNT5Q9BYG0 378 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 CDH19Q9H159 772 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 L2HGDHQ9H9P8 463 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 DNAJC11Q9NVH1 559 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 MTRRQ9UBK8 725 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 VWA7Q9Y334 891 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 PCDHB1Q9Y5F3 818 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 NCANO14594 1321 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 BCL9O00512 1426 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 BTBD19C9JJ37 291 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 CDK14O94921 469 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 GNSP15586 552 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 PPIBP23284 216 aaKnown RBP13.18□□□□□ -0.3
COL1A1-201ENST00000225964 DNASE1L1P49184 302 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 ACLYP53396 1101 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 AIF1P55008 147 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 CACNG1Q06432 222 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 HECTD2Q5U5R9 776 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 GALNT5Q7Z7M9 940 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 ATAD1Q8NBU5 361 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 UPF1Q92900 1129 aaKnown RBP eCLIP13.18□□□□□ -0.3
COL1A1-201ENST00000225964 KCTD15Q96SI1 283 aaPredicted RBP13.18□□□□□ -0.3
COL1A1-201ENST00000225964 RNF121Q9H920 327 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 PADI3Q9ULW8 664 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 CFIP05156 583 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 PGDP52209 483 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 SLC7A2P52569 658 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 RPL7AP62424 266 aaKnown RBP13.18□□□□□ -0.3
COL1A1-201ENST00000225964 PCDH1Q08174 1060 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 PUDPQ08623 228 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 ABCB10Q9NRK6 738 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 LYPLA1O75608 230 aaPredicted RBP13.18□□□□□ -0.3
COL1A1-201ENST00000225964 EPHA3P29320 983 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 RAB2AP61019 212 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 MECRQ9BV79 373 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 TRMT13Q9NUP7 481 aaKnown RBP13.18□□□□□ -0.3
COL1A1-201ENST00000225964 IRAK3Q9Y616 596 aa13.18□□□□□ -0.3
COL1A1-201ENST00000225964 ZNF208O43345 1280 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 C9P02748 559 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 CLCNKBP51801 687 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 AMZ1Q400G9 498 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 LRRC38Q5VT99 294 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 ALYREFQ86V81 257 aaKnown RBP13.17□□□□□ -0.3
COL1A1-201ENST00000225964 FBXW8Q8N3Y1 598 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 HDDC3Q8N4P3 179 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 HCAR2Q8TDS4 363 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 XAGE5Q8WWM1 108 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 RCN3Q96D15 328 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 NPAS2Q99743 824 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 ATG10Q9H0Y0 220 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 GLOD4Q9HC38 313 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 FCF1Q9Y324 198 aaKnown RBP13.17□□□□□ -0.3
COL1A1-201ENST00000225964 PCDHGA3Q9Y5H0 932 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 ZBTB11O95625 1053 aaPredicted RBP13.17□□□□□ -0.3
COL1A1-201ENST00000225964 NOMO3P69849 1222 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 SLC20A2Q08357 652 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 LAPTM5Q13571 262 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 DLG2Q15700 870 aa13.17□□□□□ -0.3
COL1A1-201ENST00000225964 PLEKHG4BQ96PX9 1271 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms