RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 ZNF7P17097 686 aaPredicted RBP14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 BPIP17213 487 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 PRDX6P30041 224 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 SPAM1P38567 509 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 SATB1Q01826 763 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 NFATC2Q13469 925 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 DHCR24Q15392 516 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 OR4D1Q15615 310 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 SLC9B1Q4ZJI4 515 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 ZNF678Q5SXM1 525 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 ZDHHC20Q5W0Z9 365 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 CRTC1Q6UUV9 634 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 TAS2R42Q7RTR8 314 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 ADGRD2Q7Z7M1 963 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 CD200R1Q8TD46 325 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 WFIKKN2Q8TEU8 576 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 FRS2Q8WU20 508 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 OSCP1Q8WVF1 389 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 MOCOSQ96EN8 888 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 PDLIM5Q96HC4 596 aaKnown RBP14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 MAELQ96JY0 434 aaKnown RBP14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 C1orf21Q9H246 121 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 MMADHCQ9H3L0 296 aaPredicted RBP14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 PIDD1Q9HB75 910 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 TRMT6Q9UJA5 497 aaKnown RBP14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 TMCO1Q9UM00 188 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 FAM50BQ9Y247 325 aa14.22□□□□□ -0.13
RTFDC1-201ENST00000023939 NUP210Q8TEM1 1887 aaPredicted RBP14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 A0A0U1RQS6 177 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 TSPAN11A1L157 253 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 NPIPB15A6NHN6 443 aaPredicted RBP14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 SPECC1L-ADORA2AF8WAN1 911 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 GSC2O15499 205 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 KLK8O60259 260 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 WFS1O76024 890 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 CLDN7O95471 211 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 ASLP04424 464 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 CISD3P0C7P0 127 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 POLR2EP19388 210 aaKnown RBP14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 ADSLP30566 484 aaPredicted RBP14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 MNAT1P51948 309 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 POLR2LP62875 67 aaKnown RBP14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 KCNC3Q14003 757 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 UBAP2LQ14157 1087 aaKnown RBP14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 UNC50Q53HI1 259 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 TMEM215Q68D42 235 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 RAB44Q7Z6P3 723 aaPredicted RBP14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 LONP2Q86WA8 852 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 TMPRSS6Q8IU80 811 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 SPNS2Q8IVW8 549 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 RBFAQ8N0V3 343 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 AFAP1L2Q8N4X5 818 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 TEX9Q8N6V9 391 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 OR2A12Q8NGT7 310 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 MAGEC3Q8TD91 643 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 ING5Q8WYH8 240 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 MRGPRX3Q96LB0 322 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 LRRC3BQ96PB8 259 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 CADM1Q9BY67 442 aaKnown RBP14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 SFXN1Q9H9B4 322 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 CYP4F12Q9HCS2 524 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 SLC27A6Q9Y2P4 619 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 DHRS7Q9Y394 339 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 SCN8AQ9UQD0 1980 aa14.21□□□□□ -0.13
RTFDC1-201ENST00000023939 GLYATL1P3A0A0U1RQE8 302 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 SYCE1LA8MT33 242 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 GYG2O15488 501 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 NIPSNAP2O75323 286 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 ATP6V1G2O95670 118 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 CYP17A1P05093 508 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 ENO1P06733 434 aaKnown RBP14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 SRPRAP08240 638 aaKnown RBP14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 CLCN7P51798 805 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 IL2P60568 153 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 CBX2Q14781 532 aaPredicted RBP14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 SNCBQ16143 134 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 ACCSLQ4AC99 568 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 SH2D4BQ5SQS7 431 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 BRAT1Q6PJG6 821 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 FAM151BQ6UXP7 276 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 RINLQ6ZS11 566 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 ACAD11Q709F0 780 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 RBM23Q86U06 439 aaKnown RBP14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 SERPINA9Q86WD7 417 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 CPSF7Q8N684 471 aaKnown RBP14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 PAF1Q8N7H5 531 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 GIMAP7Q8NHV1 300 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 OR52B2Q96RD2 323 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 C1QTNF3Q9BXJ4 246 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 ASB8Q9H765 288 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 ACSS2Q9NR19 701 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 DUS2Q9NX74 493 aaKnown RBP14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 CDYLQ9Y232 598 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 STK38LQ9Y2H1 464 aa14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 YBX2Q9Y2T7 364 aaKnown RBP14.21□□□□□ -0.14
RTFDC1-201ENST00000023939 GBF1Q92538 1859 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 B2RBV5 119 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 STX16-NPEPL1H3BU86 382 aa14.2□□□□□ -0.14
RTFDC1-201ENST00000023939 STX16O14662 325 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms