RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 SykP48025 629 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ctps1P70698 591 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Fam20cQ5MJS3 579 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Il17aQ62386 158 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 CcncQ62447 283 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ca4Q64444 305 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gpr139Q80UC8 345 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Slc36a3Q811P0 477 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Slc6a15Q8BG16 729 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Znf451Q8C0P7 1056 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Casp9Q8C3Q9 454 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Parp9Q8CAS9 866 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Fbxo48Q8CAT8 161 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Bag5Q8CI32 447 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Zmiz2Q8CIE2 920 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Acap1Q8K2H4 740 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Znf668Q8K2R5 619 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Abhd11Q8K4F5 307 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Timp4Q9JHB3 224 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm3604A0A087WPN2 559 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm13276A0A087WR18 182 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Olfr566A0A1B0GST0 319 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Klhdc7bA0A286YD60 1263 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 9230113P08RikD3YWX3 137 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm5160F8VPN3 147 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Rundc3aO08576 446 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Socs2O35717 198 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 FynP39688 537 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 PrkacbP68181 351 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Serpinb5P70124 375 aaKnown RBP9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Tmem102Q3UPR7 509 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 KrtdapQ3V2T4 102 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Dnajc16Q80TN4 772 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 1700001J03RikQ80ZR8 219 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Zmym6Q8BS54 1249 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Vmn1r203Q8R273 311 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Olfr695Q8VFM3 315 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Znf622Q91VY9 476 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 GhdcQ99J23 532 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Idh3aQ9D6R2 366 aaKnown RBP9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Slc13a2Q9ES88 586 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Rpl38Q9JJI8 70 aaKnown RBP9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ninj2Q9JL89 143 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Psmd13Q9WVJ2 376 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Dctn3Q9Z0Y1 186 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 4933424G06RikA0A140LIP3 267 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Vmn2r125D3Z3M1 369 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm6811E9Q3Y8 510 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Akt1P31750 480 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 InaP46660 501 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 SirpaP97797 513 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Trim40Q3UWA4 246 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 MslnQ61468 625 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Amigo1Q80ZD8 492 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Epb41l5Q8BGS1 731 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pgm2l1Q8CAA7 621 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 BicralQ8CHH5 1074 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Olfr1361Q8VFH0 317 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Usp3Q91W36 520 aaKnown RBP9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Dio3Q91ZI8 304 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 ArhgdiaQ99PT1 204 aaKnown RBP9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Slco1c1Q9ERB5 715 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 B4galt4Q9JJ04 344 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 IkbkeQ9R0T8 717 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 St6galnac4Q9R2B6 360 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Numa1E9Q7G0 2094 aaKnown RBP9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pkd2l1A2A259 760 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Znf518bB2RRE4 1077 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 EXOC1LB9EK06 172 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 BdnfP21237 249 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 BgnP28653 369 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Impdh1P50096 514 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 AdslP54822 484 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pcbp1P60335 356 aaKnown RBP9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 IhhP97812 411 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Dusp2Q05922 318 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Shcbp1lQ3TTP0 639 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Zmat1Q3V0C1 714 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Rabl6Q5U3K5 725 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Crtc1Q68ED7 630 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Olfr667Q7TRP4 326 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Clec2eQ80XD9 204 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cpped1Q8BFS6 312 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ppm1nQ8BGL1 404 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 4933402J07RikQ8BHX0 270 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Amer2Q8CCJ4 672 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Lrrc56Q8K375 552 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Nle1Q8VEJ4 485 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Rad51cQ924H5 366 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Dpy30Q99LT0 99 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Mbtps1Q9WTZ2 1052 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Olfr1480A0A140LIR8 359 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pgbd1E9Q492 415 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pbx3O35317 434 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Tnfsf4P43488 198 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Slc16a1P53986 493 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 HpcaP84075 193 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Hrh2P97292 397 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gdf3Q07104 366 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ebf1Q07802 591 aa9.68□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms