RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 PLAC1Q9HBJ0 212 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 MOCS1Q9NZB8 636 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 NINJ2Q9NZG7 142 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 CD84Q9UIB8 345 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.26□□□□□ -0.45
LINC00339-213ENST00000642137 PCDHGA2Q9Y5H1 932 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 SLC30A1Q9Y6M5 507 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 THADAQ6YHU6 1953 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 ABCA7Q8IZY2 2146 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 ZDBF2Q9HCK1 2354 aa12.26□□□□□ -0.45
LINC00339-213ENST00000642137 PLXNA2O75051 1894 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 ZNF106Q9H2Y7 1883 aaKnown RBP12.25□□□□□ -0.45
LINC00339-213ENST00000642137 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 CCDC151A5D8V7 595 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 GOLGA8CPA6NN73 597 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 PRAMEF26H0Y7S4 382 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 GAPDHSO14556 408 aaPredicted RBP12.25□□□□□ -0.45
LINC00339-213ENST00000642137 TOR1BO14657 336 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 ERLIN1O75477 346 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 RHOBTB1O94844 696 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 CD27P26842 260 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 ARNTP27540 789 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 AKT2P31751 481 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 PHBP35232 272 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 TRIM23P36406 574 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 GPR1P46091 355 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 CACNG1Q06432 222 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 CHRNA6Q15825 494 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 ALS2CLQ60I27 953 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 AFTPHQ6ULP2 937 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 SLC41A1Q8IVJ1 513 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 TMEFF1Q8IYR6 380 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 DEFB119Q8N690 84 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 GPR150Q8NGU9 434 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 GABPB2Q8TAK5 448 aaPredicted RBP12.25□□□□□ -0.45
LINC00339-213ENST00000642137 FAM174AQ8TBP5 190 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 CALML6Q8TD86 181 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 HNRNPLLQ8WVV9 542 aaKnown RBP12.25□□□□□ -0.45
LINC00339-213ENST00000642137 SCG3Q8WXD2 468 aaKnown RBP12.25□□□□□ -0.45
LINC00339-213ENST00000642137 DNASE2BQ8WZ79 361 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 VPS35Q96QK1 796 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 ORAI3Q9BRQ5 295 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 SPATA16Q9BXB7 569 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 FUT8Q9BYC5 575 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 ASB8Q9H765 288 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 MBNL1Q9NR56 388 aaKnown RBP12.25□□□□□ -0.45
LINC00339-213ENST00000642137 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.25□□□□□ -0.45
LINC00339-213ENST00000642137 VCANP13611 3396 aa12.25□□□□□ -0.45
LINC00339-213ENST00000642137 TRBV5-4A0A0C4DH59 114 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 CCL22O00626 93 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 FPGTO14772 594 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 RAD51BO15315 384 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 CD3EAPO15446 510 aaKnown RBP12.24□□□□□ -0.45
LINC00339-213ENST00000642137 UGT1A9O60656 530 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 PRAMEF1O95521 474 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 HOXC4P09017 264 aaPredicted RBP12.24□□□□□ -0.45
LINC00339-213ENST00000642137 UGT1A6P19224 532 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 ITGALP20701 1170 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 UGT1A1P22309 533 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 UGT1A4P22310 534 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 FOXN2P32314 431 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 UGT1A3P35503 534 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 UGT1A5P35504 534 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 PPARGP37231 505 aaPredicted RBP12.24□□□□□ -0.45
LINC00339-213ENST00000642137 THOC5Q13769 683 aaKnown RBP12.24□□□□□ -0.45
LINC00339-213ENST00000642137 STAT4Q14765 748 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 IRF4Q15306 451 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 PLK5Q496M5 336 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 ATP13A5Q4VNC0 1218 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 FASTKD1Q53R41 847 aaKnown RBP12.24□□□□□ -0.45
LINC00339-213ENST00000642137 ZRANB3Q5FWF4 1079 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 WDR45BQ5MNZ6 344 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 LYPLAL1Q5VWZ2 237 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 PMS2CLQ68D20 193 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 NEPROQ6NW34 567 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 FAM151BQ6UXP7 276 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 ADAMTSL4Q6UY14 1074 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 CERS6Q6ZMG9 384 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 PTAR1Q7Z6K3 402 aaPredicted RBP12.24□□□□□ -0.45
LINC00339-213ENST00000642137 KCNMB4Q86W47 210 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 BTN2A2Q8WVV5 523 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.24□□□□□ -0.45
LINC00339-213ENST00000642137 ULK4Q96C45 1275 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 CERS2Q96G23 380 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 BMFQ96LC9 184 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 AGAP2Q99490 1192 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 VPS37BQ9H9H4 285 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 UGT1A7Q9HAW7 530 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 UGT1A10Q9HAW8 530 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 UGT1A8Q9HAW9 530 aa12.24□□□□□ -0.45
LINC00339-213ENST00000642137 C20orf96Q9NUD7 363 aaPredicted RBP12.24□□□□□ -0.45
LINC00339-213ENST00000642137 TCRBV9S1A1TA0A576 114 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 OR51F1A6NGY5 319 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 MEI4A8MW99 385 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 DLL1O00548 723 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 RIPK2O43353 540 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 SOD1P00441 154 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 ABHD2P08910 425 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 ERVK-10P10266 1014 aa12.23□□□□□ -0.45
LINC00339-213ENST00000642137 STX2P32856 288 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms