RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	PSTK	Q8IV42	348 aa	Known RBP	10.03	□□□□□ -0.8
PHGDH-222	ENST00000641587	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	10.03	□□□□□ -0.8
PHGDH-222	ENST00000641587	MS4A14	Q96JA4	679 aa		10.03	□□□□□ -0.8
PHGDH-222	ENST00000641587	KCTD15	Q96SI1	283 aa	Predicted RBP	10.03	□□□□□ -0.8
PHGDH-222	ENST00000641587	CMKLR1	Q99788	373 aa		10.03	□□□□□ -0.8
PHGDH-222	ENST00000641587	NUDT22	Q9BRQ3	303 aa		10.03	□□□□□ -0.8
PHGDH-222	ENST00000641587	TUBB2B	Q9BVA1	445 aa		10.03	□□□□□ -0.8
PHGDH-222	ENST00000641587	LGR4	Q9BXB1	951 aa		10.03	□□□□□ -0.8
PHGDH-222	ENST00000641587	SLC25A18	Q9H1K4	315 aa		10.03	□□□□□ -0.8
PHGDH-222	ENST00000641587	EPN3	Q9H201	632 aa		10.03	□□□□□ -0.8
PHGDH-222	ENST00000641587	DPEP2	Q9H4A9	486 aa		10.03	□□□□□ -0.8
PHGDH-222	ENST00000641587	PCDH18	Q9HCL0	1135 aa		10.03	□□□□□ -0.8
PHGDH-222	ENST00000641587	LRIT1	Q9P2V4	623 aa		10.03	□□□□□ -0.8
PHGDH-222	ENST00000641587	CDC23	Q9UJX2	597 aa		10.03	□□□□□ -0.8
PHGDH-222	ENST00000641587	MFHAS1	Q9Y4C4	1052 aa		10.03	□□□□□ -0.8
PHGDH-222	ENST00000641587	NBAS	A2RRP1	2371 aa		10.02	□□□□□ -0.8
PHGDH-222	ENST00000641587	TSPAN11	A1L157	253 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	RASA4B	C9J798	803 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	EEF2K	O00418	725 aa	Known RBP	10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	CES2	O00748	559 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	DAPK3	O43293	454 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	RASA4	O43374	803 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	B4GAT1	O43505	415 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	RECQL5	O94762	991 aa	Predicted RBP	10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	FGG	P02679	453 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	CD48	P09326	243 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	GM2A	P17900	193 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	EPHB2	P29323	1055 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	TPI1	P60174	286 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	COPS2	P61201	443 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	DYNLT1	P63172	113 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	B4GALNT1	Q00973	533 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	RALGDS	Q12967	914 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	MMRN1	Q13201	1228 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	MTM1	Q13496	603 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	ARHGEF7	Q14155	803 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	DPYSL3	Q14195	570 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	DPYSL2	Q16555	572 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	WHAMMP3	Q1A5X7	153 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	LONRF2	Q1L5Z9	754 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	TFDP3	Q5H9I0	405 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	OGFOD3	Q6PK18	319 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	XKR5	Q6UX68	686 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	ZNF574	Q6ZN55	896 aa	Predicted RBP	10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	RTL3	Q8N8U3	475 aa	Known RBP	10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	ZSCAN1	Q8NBB4	408 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	OR6C4	Q8NGE1	309 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	OR56A4	Q8NGH8	313 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	PATE1	Q8WXA2	126 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	NAP1L3	Q99457	506 aa	Predicted RBP	10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	SEMA3C	Q99985	751 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	HEMGN	Q9BXL5	484 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	SLC12A9	Q9BXP2	914 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	MAK16	Q9BXY0	300 aa	Known RBP	10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	OSBPL8	Q9BZF1	889 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	SUV39H2	Q9H5I1	410 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	CYP4F12	Q9HCS2	524 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	SPATS2L	Q9NUQ6	558 aa	Known RBP	10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	GEMIN8	Q9NWZ8	242 aa	Known RBP	10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	SMARCAL1	Q9NZC9	954 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	ANKMY1	Q9P2S6	941 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	MOSPD1	Q9UJG1	213 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	ATP8A1	Q9Y2Q0	1164 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	PCDHB11	Q9Y5F2	797 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	MRFAP1	Q9Y605	127 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	DGKB	Q9Y6T7	804 aa		10.02	□□□□□ -0.81
PHGDH-222	ENST00000641587	hCG_1818297	A0A087WSY0	165 aa		10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	GOLGA6L10	A0A0M3HER8	536 aa		10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587		A8MX80	341 aa		10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587		J3KR12	359 aa		10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	FGF3	P11487	239 aa	Predicted RBP	10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	LIF	P15018	202 aa		10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	CDKN2B	P42772	138 aa		10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	KIAA1024L	P59773	190 aa		10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	SERINC3	Q13530	473 aa		10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	IGFBP7	Q16270	282 aa		10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	PPP2R5E	Q16537	467 aa		10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	INO80D	Q53TQ3	878 aa	Predicted RBP	10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	SLC13A5	Q86YT5	568 aa	Predicted RBP	10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	MNS1	Q8NEH6	495 aa		10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	PTCD2	Q8WV60	388 aa	Known RBP	10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	NKD1	Q969G9	470 aa		10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	CELF6	Q96J87	481 aa	Known RBP	10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	CCDC74B	Q96LY2	380 aa		10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	NSMCE3	Q96MG7	304 aa		10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	ZNF670	Q9BS34	389 aa		10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	PDF	Q9HBH1	243 aa		10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	TMEM9	Q9P0T7	183 aa		10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	UBA2	Q9UBT2	640 aa	Predicted RBP	10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	FLNC	Q14315	2725 aa		10.01	□□□□□ -0.81
PHGDH-222	ENST00000641587	IGHV5-10-1	A0A0J9YXX1	117 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	PRSS38	A1L453	326 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	C3orf70	A6NLC5	250 aa	Predicted RBP	10	□□□□□ -0.81
PHGDH-222	ENST00000641587	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	10	□□□□□ -0.81
PHGDH-222	ENST00000641587	STMND1	H3BQB6	276 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	CACNB4	O00305	520 aa	Predicted RBP	10	□□□□□ -0.81
PHGDH-222	ENST00000641587	APOL1	O14791	398 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	NUDT21	O43809	227 aa	Known RBP	10	□□□□□ -0.81
PHGDH-222	ENST00000641587	TJP3	O95049	919 aa		10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 63 ms