RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 SNX32Q86XE0 403 aa15.06■□□□□ 0
TRIM3-215ENST00000639856 CMTM8Q8IZV2 173 aa15.06■□□□□ 0
TRIM3-215ENST00000639856 FBXW8Q8N3Y1 598 aa15.06■□□□□ 0
TRIM3-215ENST00000639856 OR4L1Q8NH43 312 aa15.06■□□□□ 0
TRIM3-215ENST00000639856 CEP70Q8NHQ1 597 aa15.06■□□□□ 0
TRIM3-215ENST00000639856 PHF21BQ96EK2 531 aa15.06■□□□□ 0
TRIM3-215ENST00000639856 FAR2Q96K12 515 aa15.06■□□□□ 0
TRIM3-215ENST00000639856 ALG9Q9H6U8 611 aa15.06■□□□□ 0
TRIM3-215ENST00000639856 ZBTB26Q9HCK0 441 aa15.06■□□□□ 0
TRIM3-215ENST00000639856 G3BP2Q9UN86 482 aaKnown RBP15.06■□□□□ 0
TRIM3-215ENST00000639856 POMPQ9Y244 141 aa15.06■□□□□ 0
TRIM3-215ENST00000639856 SORBS2O94875 1100 aaKnown RBP15.05■□□□□ 0
TRIM3-215ENST00000639856 CRTAMO95727 393 aa15.05■□□□□ 0
TRIM3-215ENST00000639856 PENKP01210 267 aaPredicted RBP15.05■□□□□ 0
TRIM3-215ENST00000639856 PDHA1P08559 390 aa15.05■□□□□ 0
TRIM3-215ENST00000639856 PTPN2P17706 415 aa15.05■□□□□ 0
TRIM3-215ENST00000639856 PLK1P53350 603 aa15.05■□□□□ 0
TRIM3-215ENST00000639856 CYLC2Q14093 348 aaPredicted RBP15.05■□□□□ 0
TRIM3-215ENST00000639856 CPXM2Q8N436 756 aa15.05■□□□□ 0
TRIM3-215ENST00000639856 AFAP1L2Q8N4X5 818 aa15.05■□□□□ 0
TRIM3-215ENST00000639856 JADE3Q92613 823 aa15.05■□□□□ 0
TRIM3-215ENST00000639856 CDKN2AIPNLQ96HQ2 116 aa15.05■□□□□ 0
TRIM3-215ENST00000639856 CERS4Q9HA82 394 aa15.05■□□□□ 0
TRIM3-215ENST00000639856 LHX3Q9UBR4 397 aa15.05■□□□□ 0
TRIM3-215ENST00000639856 ARIH1Q9Y4X5 557 aaPredicted RBP15.05■□□□□ 0
TRIM3-215ENST00000639856 PCDHGC4Q9Y5F7 938 aa15.05■□□□□ 0
TRIM3-215ENST00000639856 ATG2AQ2TAZ0 1938 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 AIM2O14862 343 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 PRAMEF12O95522 483 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 PRLP01236 227 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 SLC4A1P02730 911 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 IMPDH1P20839 514 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 CD70P32970 193 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 NUDT2P50583 147 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 SUOXP51687 545 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 STC1P52823 247 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 TIAL1Q01085 375 aaKnown RBP eCLIP15.05■□□□□ -0
TRIM3-215ENST00000639856 HERC3Q15034 1050 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 TYSND1Q2T9J0 566 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 ATXN7L2Q5T6C5 722 aaPredicted RBP15.05■□□□□ -0
TRIM3-215ENST00000639856 SDCCAG8Q86SQ7 713 aaPredicted RBP15.05■□□□□ -0
TRIM3-215ENST00000639856 HPS6Q86YV9 775 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 USP13Q92995 863 aaPredicted RBP15.05■□□□□ -0
TRIM3-215ENST00000639856 CCDC124Q96CT7 223 aaKnown RBP15.05■□□□□ -0
TRIM3-215ENST00000639856 TTC1Q99614 292 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 TRMOQ9BU70 441 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 TDRD1Q9BXT4 1180 aaKnown RBP15.05■□□□□ -0
TRIM3-215ENST00000639856 POPDC3Q9HBV1 291 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 S100A14Q9HCY8 104 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 NLE1Q9NVX2 485 aaPredicted RBP15.05■□□□□ -0
TRIM3-215ENST00000639856 NDE1Q9NXR1 346 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 PPM1HQ9ULR3 514 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 ZNF510Q9Y2H8 683 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 MTF2Q9Y483 593 aaPredicted RBP15.05■□□□□ -0
TRIM3-215ENST00000639856 SPO11Q9Y5K1 396 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 HCFC2Q9Y5Z7 792 aa15.05■□□□□ -0
TRIM3-215ENST00000639856 MAP3K7O43318 606 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 BMP1P13497 986 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 ABL2P42684 1182 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 KCNC1P48547 511 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 ZNF140P52738 457 aaPredicted RBP15.04■□□□□ -0
TRIM3-215ENST00000639856 LMAN2Q12907 356 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 CCNIQ14094 377 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 C16orf89Q6UX73 402 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 GRASPQ7Z6J2 395 aaPredicted RBP15.04■□□□□ -0
TRIM3-215ENST00000639856 ADGRD2Q7Z7M1 963 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 ADGRG6Q86SQ4 1221 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 CUZD1Q86UP6 607 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 DCAF4L2Q8NA75 395 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 KYQ8NBH2 561 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 ING5Q8WYH8 240 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 RMDN1Q96DB5 314 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 L3HYPDHQ96EM0 354 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 GSTO2Q9H4Y5 243 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 PRPF19Q9UMS4 504 aaKnown RBP15.04■□□□□ -0
TRIM3-215ENST00000639856 COPG1Q9Y678 874 aaKnown RBP15.04■□□□□ -0
TRIM3-215ENST00000639856 SMAD6O43541 496 aaKnown RBP15.04■□□□□ -0
TRIM3-215ENST00000639856 SKAP2O75563 359 aaPredicted RBP15.04■□□□□ -0
TRIM3-215ENST00000639856 CD1DP15813 335 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 ZNF37AP17032 561 aaPredicted RBP15.04■□□□□ -0
TRIM3-215ENST00000639856 CES1P23141 567 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 PMLP29590 882 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 NFKB2Q00653 900 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 PTPRRQ15256 657 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 MPPE1Q53F39 396 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 TCHHL1Q5QJ38 904 aaPredicted RBP15.04■□□□□ -0
TRIM3-215ENST00000639856 RPS27LQ71UM5 84 aaKnown RBP15.04■□□□□ -0
TRIM3-215ENST00000639856 DSELQ8IZU8 1212 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 KIRREL3Q8IZU9 778 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 PELI3Q8N2H9 469 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 LPCAT1Q8NF37 534 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 PTERQ96BW5 349 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 MARK4Q96L34 752 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 ZSWIM3Q96MP5 696 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 AARSD1Q9BTE6 412 aaKnown RBP15.04■□□□□ -0
TRIM3-215ENST00000639856 MEAF6Q9HAF1 191 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 TNFRSF12AQ9NP84 129 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 INTS10Q9NVR2 710 aaKnown RBP15.04■□□□□ -0
TRIM3-215ENST00000639856 FIS1Q9Y3D6 152 aa15.04■□□□□ -0
TRIM3-215ENST00000639856 RAI2Q9Y5P3 530 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 180.2 ms