RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 PGLSO95336 258 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 HSPA9P38646 679 aaKnown RBP14.91□□□□□ -0.02
SYNE2-228ENST00000639659 EPHB1P54762 984 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 MC2RQ01718 297 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 FOXM1Q08050 763 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 MAMLD1Q13495 774 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 SMTNL2Q2TAL5 461 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 C4orf17Q53FE4 359 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 PYCR3Q53H96 274 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 CDKAL1Q5VV42 579 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 HIST2H2BCQ6DN03 193 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 TMCO3Q6UWJ1 677 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 LZTR1Q8N653 840 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 ARFGAP1Q8N6T3 406 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 ANKRD20A12PQ8NF67 263 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 HSPH1Q92598 858 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 ZNF599Q96NL3 588 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 AGAP2Q99490 1192 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 EIF3CQ99613 913 aaKnown RBP14.91□□□□□ -0.02
SYNE2-228ENST00000639659 TRIM7Q9C029 511 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 ABCG8Q9H221 673 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 LRRC4CQ9HCJ2 640 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 NT5MQ9NPB1 228 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 FANCLQ9NW38 375 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 CNOT8Q9UFF9 292 aaKnown RBP14.91□□□□□ -0.02
SYNE2-228ENST00000639659 TTLL3Q9Y4R7 772 aa14.91□□□□□ -0.02
SYNE2-228ENST00000639659 POLR1CO15160 346 aaPredicted RBP14.9□□□□□ -0.02
SYNE2-228ENST00000639659 SOD1P00441 154 aa14.9□□□□□ -0.02
SYNE2-228ENST00000639659 ATP1A1P05023 1023 aaKnown RBP14.9□□□□□ -0.02
SYNE2-228ENST00000639659 ACP5P13686 325 aa14.9□□□□□ -0.02
SYNE2-228ENST00000639659 FERP16591 822 aa14.9□□□□□ -0.02
SYNE2-228ENST00000639659 AMPD1P23109 780 aa14.9□□□□□ -0.02
SYNE2-228ENST00000639659 ARL4AP40617 200 aa14.9□□□□□ -0.02
SYNE2-228ENST00000639659 MMP13P45452 471 aa14.9□□□□□ -0.02
SYNE2-228ENST00000639659 FASLGP48023 281 aa14.9□□□□□ -0.02
SYNE2-228ENST00000639659 MLLT10P55197 1068 aa14.9□□□□□ -0.02
SYNE2-228ENST00000639659 MC1RQ01726 317 aa14.9□□□□□ -0.02
SYNE2-228ENST00000639659 ABHD18Q0P651 414 aa14.9□□□□□ -0.02
SYNE2-228ENST00000639659 DPYSQ14117 519 aa14.9□□□□□ -0.02
SYNE2-228ENST00000639659 ADAMTSL4Q6UY14 1074 aa14.9□□□□□ -0.02
SYNE2-228ENST00000639659 ATCAYQ86WG3 371 aa14.9□□□□□ -0.02
SYNE2-228ENST00000639659 SFRP1Q8N474 314 aa14.9□□□□□ -0.02
SYNE2-228ENST00000639659 ENOX1Q8TC92 643 aaKnown RBP14.9□□□□□ -0.02
SYNE2-228ENST00000639659 SCRN2Q96FV2 425 aa14.9□□□□□ -0.02
SYNE2-228ENST00000639659 ELMO2Q96JJ3 720 aa14.9□□□□□ -0.02
SYNE2-228ENST00000639659 MGME1Q9BQP7 344 aa14.9□□□□□ -0.02
SYNE2-228ENST00000639659 RIOK2Q9BVS4 552 aaKnown RBP14.9□□□□□ -0.02
SYNE2-228ENST00000639659 ETNK2Q9NVF9 386 aa14.9□□□□□ -0.02
SYNE2-228ENST00000639659 RPS6KL1Q9Y6S9 549 aa14.9□□□□□ -0.02
SYNE2-228ENST00000639659 KATNA1O75449 491 aa14.89□□□□□ -0.03
SYNE2-228ENST00000639659 PDHA1P08559 390 aa14.89□□□□□ -0.03
SYNE2-228ENST00000639659 TEAD1P28347 426 aa14.89□□□□□ -0.03
SYNE2-228ENST00000639659 DLSTP36957 453 aa14.89□□□□□ -0.03
SYNE2-228ENST00000639659 DPTQ07507 201 aa14.89□□□□□ -0.03
SYNE2-228ENST00000639659 KLRB1Q12918 225 aa14.89□□□□□ -0.03
SYNE2-228ENST00000639659 SQSTM1Q13501 440 aa14.89□□□□□ -0.03
SYNE2-228ENST00000639659 LRP8Q14114 963 aa14.89□□□□□ -0.03
SYNE2-228ENST00000639659 ERV3-1Q14264 604 aa14.89□□□□□ -0.03
SYNE2-228ENST00000639659 MARC1Q5VT66 337 aa14.89□□□□□ -0.03
SYNE2-228ENST00000639659 TECPR1Q7Z6L1 1165 aa14.89□□□□□ -0.03
SYNE2-228ENST00000639659 NDUFAF2Q8N183 169 aa14.89□□□□□ -0.03
SYNE2-228ENST00000639659 TEX19Q8NA77 164 aa14.89□□□□□ -0.03
SYNE2-228ENST00000639659 TBC1D10AQ9BXI6 508 aa14.89□□□□□ -0.03
SYNE2-228ENST00000639659 ULBP3Q9BZM4 244 aa14.89□□□□□ -0.03
SYNE2-228ENST00000639659 MYO1AQ9UBC5 1043 aa14.89□□□□□ -0.03
SYNE2-228ENST00000639659 TBC1D29Q9UFV1 150 aa14.89□□□□□ -0.03
SYNE2-228ENST00000639659 PCDHB3Q9Y5E6 796 aa14.89□□□□□ -0.03
SYNE2-228ENST00000639659 PCYT1BQ9Y5K3 369 aaPredicted RBP14.89□□□□□ -0.03
SYNE2-228ENST00000639659 RELNP78509 3460 aa14.89□□□□□ -0.03
SYNE2-228ENST00000639659 UTP20O75691 2785 aaKnown RBP14.88□□□□□ -0.03
SYNE2-228ENST00000639659 LGALS16A8MUM7 142 aa14.88□□□□□ -0.03
SYNE2-228ENST00000639659 LRCH4O75427 683 aa14.88□□□□□ -0.03
SYNE2-228ENST00000639659 KRT7P08729 469 aa14.88□□□□□ -0.03
SYNE2-228ENST00000639659 CCDC172P0C7W6 258 aa14.88□□□□□ -0.03
SYNE2-228ENST00000639659 CDK11BP21127 795 aaKnown RBP14.88□□□□□ -0.03
SYNE2-228ENST00000639659 STAT5AP42229 794 aa14.88□□□□□ -0.03
SYNE2-228ENST00000639659 SEPHS1P49903 392 aa14.88□□□□□ -0.03
SYNE2-228ENST00000639659 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.88□□□□□ -0.03
SYNE2-228ENST00000639659 WDR74Q6RFH5 385 aaPredicted RBP14.88□□□□□ -0.03
SYNE2-228ENST00000639659 CYP4V2Q6ZWL3 525 aaPredicted RBP14.88□□□□□ -0.03
SYNE2-228ENST00000639659 ARHGAP22Q7Z5H3 698 aa14.88□□□□□ -0.03
SYNE2-228ENST00000639659 SLC9B2Q86UD5 537 aa14.88□□□□□ -0.03
SYNE2-228ENST00000639659 ESX1Q8N693 406 aa14.88□□□□□ -0.03
SYNE2-228ENST00000639659 ZNF653Q96CK0 615 aa14.88□□□□□ -0.03
SYNE2-228ENST00000639659 SCARF2Q96GP6 870 aaPredicted RBP14.88□□□□□ -0.03
SYNE2-228ENST00000639659 MCCC1Q96RQ3 725 aaPredicted RBP14.88□□□□□ -0.03
SYNE2-228ENST00000639659 ZPBPQ9BS86 351 aa14.88□□□□□ -0.03
SYNE2-228ENST00000639659 TRIT1Q9H3H1 467 aaKnown RBP14.88□□□□□ -0.03
SYNE2-228ENST00000639659 OSGEPL1Q9H4B0 414 aa14.88□□□□□ -0.03
SYNE2-228ENST00000639659 FBXO8Q9NRD0 319 aa14.88□□□□□ -0.03
SYNE2-228ENST00000639659 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.88□□□□□ -0.03
SYNE2-228ENST00000639659 CDC14CA4D256 554 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 TMEM191CA6NGB0 347 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 MKRN2OSH3BPM6 223 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 K7EM74 188 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 MAFKO60675 156 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 DLGAP3O95886 979 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 PEX11BO96011 259 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 ZNF28P17035 718 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 F8A1P23610 371 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms