RNA–Protein interactions for RNA: ENST00000639053.1

SPIN3-219, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,778 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-219ENST00000639053 NLE1Q9NVX2 485 aaPredicted RBP15.19■□□□□ 0.02
SPIN3-219ENST00000639053 POLR3BQ9NW08 1133 aaPredicted RBP15.19■□□□□ 0.02
SPIN3-219ENST00000639053 SUN2Q9UH99 717 aa15.19■□□□□ 0.02
SPIN3-219ENST00000639053 DCTN4Q9UJW0 460 aa15.19■□□□□ 0.02
SPIN3-219ENST00000639053 RIMKLBQ9ULI2 386 aa15.19■□□□□ 0.02
SPIN3-219ENST00000639053 ANKRD6Q9Y2G4 727 aa15.19■□□□□ 0.02
SPIN3-219ENST00000639053 PPIL1Q9Y3C6 166 aa15.19■□□□□ 0.02
SPIN3-219ENST00000639053 A0A0G2JND7 137 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 A0A1W2PQ67 120 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 TSPAN11A1L157 253 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 OR51F1A6NGY5 319 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 NPIPB15A6NHN6 443 aaPredicted RBP15.18■□□□□ 0.02
SPIN3-219ENST00000639053 C2orf81A6NN90 581 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 KPNA3O00505 521 aaPredicted RBP15.18■□□□□ 0.02
SPIN3-219ENST00000639053 PRNPP04156 253 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 SERPINE1P05121 402 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 APOA4P06727 396 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 TIMP2P16035 220 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 LPOP22079 712 aaPredicted RBP15.18■□□□□ 0.02
SPIN3-219ENST00000639053 CSRP3P50461 194 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 ELAVL3Q14576 367 aaKnown RBP15.18■□□□□ 0.02
SPIN3-219ENST00000639053 CDKN3Q16667 212 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 SLC44A4Q53GD3 710 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 BRAT1Q6PJG6 821 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 CLNKQ7Z7G1 428 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 CLEC14AQ86T13 490 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 TSPAN33Q86UF1 283 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 PARP9Q8IXQ6 854 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 GABPB2Q8TAK5 448 aaPredicted RBP15.18■□□□□ 0.02
SPIN3-219ENST00000639053 PIP4K2CQ8TBX8 421 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 SKA1Q96BD8 255 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 EID2BQ96D98 161 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 SCRN2Q96FV2 425 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 VPS39Q96JC1 886 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 GPR22Q99680 433 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 GPR63Q9BZJ6 419 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 FAM96AQ9H5X1 160 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 STN1Q9H668 368 aaKnown RBP15.18■□□□□ 0.02
SPIN3-219ENST00000639053 PPM1HQ9ULR3 514 aa15.18■□□□□ 0.02
SPIN3-219ENST00000639053 CCDC162PA2VCL2 907 aa15.17■□□□□ 0.02
SPIN3-219ENST00000639053 RPP40O75818 363 aaKnown RBP15.17■□□□□ 0.02
SPIN3-219ENST00000639053 CLDN7O95471 211 aa15.17■□□□□ 0.02
SPIN3-219ENST00000639053 GRSF1Q12849 480 aaKnown RBP eCLIP15.17■□□□□ 0.02
SPIN3-219ENST00000639053 ILF2Q12905 390 aaKnown RBP15.17■□□□□ 0.02
SPIN3-219ENST00000639053 CRTC1Q6UUV9 634 aa15.17■□□□□ 0.02
SPIN3-219ENST00000639053 TPRG1Q6ZUI0 275 aa15.17■□□□□ 0.02
SPIN3-219ENST00000639053 USP45Q70EL2 814 aa15.17■□□□□ 0.02
SPIN3-219ENST00000639053 TBC1D1Q86TI0 1168 aaPredicted RBP15.17■□□□□ 0.02
SPIN3-219ENST00000639053 TMIEQ8NEW7 156 aa15.17■□□□□ 0.02
SPIN3-219ENST00000639053 OR6P1Q8NGX9 317 aa15.17■□□□□ 0.02
SPIN3-219ENST00000639053 PPP1R14CQ8TAE6 165 aa15.17■□□□□ 0.02
SPIN3-219ENST00000639053 PEX13Q92968 403 aa15.17■□□□□ 0.02
SPIN3-219ENST00000639053 ARRDC3Q96B67 414 aa15.17■□□□□ 0.02
SPIN3-219ENST00000639053 MCCC1Q96RQ3 725 aaPredicted RBP15.17■□□□□ 0.02
SPIN3-219ENST00000639053 FAM167BQ9BTA0 163 aa15.17■□□□□ 0.02
SPIN3-219ENST00000639053 BPIFA1Q9NP55 256 aa15.17■□□□□ 0.02
SPIN3-219ENST00000639053 COPG2Q9UBF2 871 aa15.17■□□□□ 0.02
SPIN3-219ENST00000639053 DKK3Q9UBP4 350 aa15.17■□□□□ 0.02
SPIN3-219ENST00000639053 LNPEPQ9UIQ6 1025 aa15.17■□□□□ 0.02
SPIN3-219ENST00000639053 TCF20Q9UGU0 1960 aaKnown RBP15.16■□□□□ 0.02
SPIN3-219ENST00000639053 A0A096LPK6 155 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 C1orf232A0A0U1RR37 186 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 C16orf96A6NNT2 1141 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 UPK3BL1B0FP48 263 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 UPK3BL2E5RIL1 263 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 STX7O15400 261 aaKnown RBP15.16■□□□□ 0.02
SPIN3-219ENST00000639053 SLC7A4O43246 635 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 H2AFYO75367 372 aaKnown RBP15.16■□□□□ 0.02
SPIN3-219ENST00000639053 COL6A2P12110 1019 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 GLULP15104 373 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 DRD1P21728 446 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 CD72P21854 359 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 PSMA3P25788 255 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 POLR2LP62875 67 aaKnown RBP15.16■□□□□ 0.02
SPIN3-219ENST00000639053 PRAMEP78395 509 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 THOC5Q13769 683 aaKnown RBP15.16■□□□□ 0.02
SPIN3-219ENST00000639053 KRT72Q14CN4 511 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 PCLAFQ15004 111 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 TAF1BQ53T94 588 aaPredicted RBP15.16■□□□□ 0.02
SPIN3-219ENST00000639053 NEPROQ6NW34 567 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 KIAA0408Q6ZU52 694 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 PARS2Q7L3T8 475 aaKnown RBP15.16■□□□□ 0.02
SPIN3-219ENST00000639053 PTAR1Q7Z6K3 402 aaPredicted RBP15.16■□□□□ 0.02
SPIN3-219ENST00000639053 MTDHQ86UE4 582 aaKnown RBP15.16■□□□□ 0.02
SPIN3-219ENST00000639053 ZC3HC1Q86WB0 502 aaKnown RBP15.16■□□□□ 0.02
SPIN3-219ENST00000639053 ADHFE1Q8IWW8 467 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 RDH11Q8TC12 318 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 MAGEC3Q8TD91 643 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 CDKN2AIPNLQ96HQ2 116 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 LYSMD1Q96S90 227 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 WWP1Q9H0M0 922 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 IL17CQ9P0M4 197 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 TMEM216Q9P0N5 145 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 HEY2Q9UBP5 337 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 B4GALT6Q9UBX8 382 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 NPC1O15118 1278 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 HAUS5O94927 633 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 GOT2P00505 430 aaKnown RBP15.16■□□□□ 0.02
SPIN3-219ENST00000639053 MYL2P10916 166 aa15.16■□□□□ 0.02
SPIN3-219ENST00000639053 FGF3P11487 239 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms