RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 RAVER1Q8IY67 606 aaKnown RBP21.66■■□□□ 1.06
SCN1B-206ENST00000638536 RASGEF1CQ8N431 466 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 CCL4L1Q8NHW4 92 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 BTN2A2Q8WVV5 523 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 TMEM168Q9H0V1 697 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 SUDS3Q9H7L9 328 aaPredicted RBP21.66■■□□□ 1.06
SCN1B-206ENST00000638536 SPASTQ9UBP0 616 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 MOSPD1Q9UJG1 213 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 WASF3Q9UPY6 502 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 PCYT1BQ9Y5K3 369 aaPredicted RBP21.66■■□□□ 1.06
SCN1B-206ENST00000638536 OAS3Q9Y6K5 1087 aaKnown RBP21.66■■□□□ 1.06
SCN1B-206ENST00000638536 DGKBQ9Y6T7 804 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 U3KQA8 63 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 PLXNB3Q9ULL4 1909 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 PRSS38A1L453 326 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 YY2O15391 372 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 RASGRP1O95267 797 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 STIP1P31948 543 aaKnown RBP21.66■■□□□ 1.06
SCN1B-206ENST00000638536 CCDC173Q0VFZ6 552 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 FOXC1Q12948 553 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 CCDC157Q569K6 752 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 PDCD7Q8N8D1 485 aaKnown RBP21.66■■□□□ 1.06
SCN1B-206ENST00000638536 PRELID2Q8N945 189 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 COX14Q96I36 57 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 ARFGAP3Q9NP61 516 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 NLGN3Q9NZ94 848 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 ST14Q9Y5Y6 855 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 ARL5AQ9Y689 179 aa21.66■■□□□ 1.06
SCN1B-206ENST00000638536 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.66■■□□□ 1.06
SCN1B-206ENST00000638536 KIF5CO60282 957 aa21.65■■□□□ 1.06
SCN1B-206ENST00000638536 TNFP01375 233 aa21.65■■□□□ 1.06
SCN1B-206ENST00000638536 PMLP29590 882 aa21.65■■□□□ 1.06
SCN1B-206ENST00000638536 HMGCLP35914 325 aa21.65■■□□□ 1.06
SCN1B-206ENST00000638536 P3H1Q32P28 736 aa21.65■■□□□ 1.06
SCN1B-206ENST00000638536 TBL1YQ9BQ87 522 aa21.65■■□□□ 1.06
SCN1B-206ENST00000638536 PIH1D1Q9NWS0 290 aaKnown RBP21.65■■□□□ 1.06
SCN1B-206ENST00000638536 IL17CQ9P0M4 197 aa21.65■■□□□ 1.06
SCN1B-206ENST00000638536 SLC17A4Q9Y2C5 497 aa21.65■■□□□ 1.06
SCN1B-206ENST00000638536 KCTD3Q9Y597 815 aa21.65■■□□□ 1.06
SCN1B-206ENST00000638536 CSNK1G3Q9Y6M4 447 aa21.65■■□□□ 1.06
SCN1B-206ENST00000638536 RGSL1A5PLK6 1076 aa21.64■■□□□ 1.05
SCN1B-206ENST00000638536 NEMP2A6NFY4 417 aa21.64■■□□□ 1.05
SCN1B-206ENST00000638536 TNFRSF10CO14798 259 aa21.64■■□□□ 1.05
SCN1B-206ENST00000638536 ZNF185O15231 689 aa21.64■■□□□ 1.05
SCN1B-206ENST00000638536 DKK1O94907 266 aa21.64■■□□□ 1.05
SCN1B-206ENST00000638536 KELP23276 732 aa21.64■■□□□ 1.05
SCN1B-206ENST00000638536 CA5AP35218 305 aa21.64■■□□□ 1.05
SCN1B-206ENST00000638536 BLKP51451 505 aa21.64■■□□□ 1.05
SCN1B-206ENST00000638536 ZNF648Q5T619 568 aaPredicted RBP21.64■■□□□ 1.05
SCN1B-206ENST00000638536 DRICH1Q6PGQ1 229 aaPredicted RBP21.64■■□□□ 1.05
SCN1B-206ENST00000638536 MICALCLQ6ZW33 695 aa21.64■■□□□ 1.05
SCN1B-206ENST00000638536 GLT6D1Q7Z4J2 308 aa21.64■■□□□ 1.05
SCN1B-206ENST00000638536 SFTPA2Q8IWL1 248 aa21.64■■□□□ 1.05
SCN1B-206ENST00000638536 C17orf53Q8N3J3 647 aaPredicted RBP21.64■■□□□ 1.05
SCN1B-206ENST00000638536 CHCHD4Q8N4Q1 142 aa21.64■■□□□ 1.05
SCN1B-206ENST00000638536 HIC2Q96JB3 615 aa21.64■■□□□ 1.05
SCN1B-206ENST00000638536 APOLD1Q96LR9 279 aa21.64■■□□□ 1.05
SCN1B-206ENST00000638536 OSBPL9Q96SU4 736 aa21.64■■□□□ 1.05
SCN1B-206ENST00000638536 SPATA16Q9BXB7 569 aa21.64■■□□□ 1.05
SCN1B-206ENST00000638536 CARS2Q9HA77 564 aaKnown RBP21.64■■□□□ 1.05
SCN1B-206ENST00000638536 ETNK1Q9HBU6 452 aa21.64■■□□□ 1.05
SCN1B-206ENST00000638536 TMPRSS11EQ9UL52 423 aa21.64■■□□□ 1.05
SCN1B-206ENST00000638536 SUFUQ9UMX1 484 aa21.64■■□□□ 1.05
SCN1B-206ENST00000638536 ZNF106Q9H2Y7 1883 aaKnown RBP21.64■■□□□ 1.05
SCN1B-206ENST00000638536 LMO7DNF2Z398 122 aa21.63■■□□□ 1.05
SCN1B-206ENST00000638536 GPR39O43194 453 aa21.63■■□□□ 1.05
SCN1B-206ENST00000638536 HYAL3O43820 417 aaPredicted RBP21.63■■□□□ 1.05
SCN1B-206ENST00000638536 ZNF189O75820 626 aaPredicted RBP21.63■■□□□ 1.05
SCN1B-206ENST00000638536 CTSEP14091 401 aa21.63■■□□□ 1.05
SCN1B-206ENST00000638536 TNNT3P45378 269 aaPredicted RBP21.63■■□□□ 1.05
SCN1B-206ENST00000638536 ACADVLP49748 655 aa21.63■■□□□ 1.05
SCN1B-206ENST00000638536 ATL2Q8NHH9 583 aa21.63■■□□□ 1.05
SCN1B-206ENST00000638536 PBKQ96KB5 322 aa21.63■■□□□ 1.05
SCN1B-206ENST00000638536 TBATAQ96M53 351 aa21.63■■□□□ 1.05
SCN1B-206ENST00000638536 AP1M1Q9BXS5 423 aa21.63■■□□□ 1.05
SCN1B-206ENST00000638536 TRABDQ9H4I3 376 aa21.63■■□□□ 1.05
SCN1B-206ENST00000638536 ARNT2Q9HBZ2 717 aa21.63■■□□□ 1.05
SCN1B-206ENST00000638536 DRG1Q9Y295 367 aaKnown RBP21.63■■□□□ 1.05
SCN1B-206ENST00000638536 PLEKHM1Q9Y4G2 1056 aa21.63■■□□□ 1.05
SCN1B-206ENST00000638536 PDE2AO00408 941 aaPredicted RBP21.62■■□□□ 1.05
SCN1B-206ENST00000638536 FANCGO15287 622 aa21.62■■□□□ 1.05
SCN1B-206ENST00000638536 TPH1P17752 444 aa21.62■■□□□ 1.05
SCN1B-206ENST00000638536 RPL22P35268 128 aaKnown RBP21.62■■□□□ 1.05
SCN1B-206ENST00000638536 CLDN6P56747 220 aa21.62■■□□□ 1.05
SCN1B-206ENST00000638536 DCDC1P59894 354 aa21.62■■□□□ 1.05
SCN1B-206ENST00000638536 MARK2Q7KZI7 788 aaKnown RBP21.62■■□□□ 1.05
SCN1B-206ENST00000638536 SRPK1Q96SB4 655 aaKnown RBP21.62■■□□□ 1.05
SCN1B-206ENST00000638536 IL26Q9NPH9 171 aa21.62■■□□□ 1.05
SCN1B-206ENST00000638536 NFKBIL1Q9UBC1 381 aaPredicted RBP21.62■■□□□ 1.05
SCN1B-206ENST00000638536 FREM2Q5SZK8 3169 aa21.62■■□□□ 1.05
SCN1B-206ENST00000638536 AP2A1O95782 977 aa21.62■■□□□ 1.05
SCN1B-206ENST00000638536 CKMT2P17540 419 aa21.62■■□□□ 1.05
SCN1B-206ENST00000638536 GRIA1P42261 906 aa21.62■■□□□ 1.05
SCN1B-206ENST00000638536 GNPDA1P46926 289 aa21.62■■□□□ 1.05
SCN1B-206ENST00000638536 TTC27Q6P3X3 843 aa21.62■■□□□ 1.05
SCN1B-206ENST00000638536 NRROSQ86YC3 692 aa21.62■■□□□ 1.05
SCN1B-206ENST00000638536 MAIP1Q8WWC4 291 aa21.62■■□□□ 1.05
SCN1B-206ENST00000638536 SCARF2Q96GP6 870 aaPredicted RBP21.62■■□□□ 1.05
SCN1B-206ENST00000638536 HACD3Q9P035 362 aa21.62■■□□□ 1.05
SCN1B-206ENST00000638536 SNX12Q9UMY4 172 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms