RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 SNIP1Q8TAD8 396 aaKnown RBP17.63■□□□□ 0.41
PNKP-230ENST00000638016 TADA1Q96BN2 335 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 PRR11Q96HE9 360 aaPredicted RBP17.63■□□□□ 0.41
PNKP-230ENST00000638016 PANX2Q96RD6 677 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 MLPHQ9BV36 600 aaPredicted RBP17.63■□□□□ 0.41
PNKP-230ENST00000638016 HEMGNQ9BXL5 484 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 LACRTQ9GZZ8 138 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 GLOD4Q9HC38 313 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 ARFGAP3Q9NP61 516 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 ASCL3Q9NQ33 180 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 TAAR2Q9P1P5 351 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 CNOT6Q9ULM6 557 aaKnown RBP17.63■□□□□ 0.41
PNKP-230ENST00000638016 RPL26L1Q9UNX3 145 aaKnown RBP17.63■□□□□ 0.41
PNKP-230ENST00000638016 EPN1Q9Y6I3 576 aaPredicted RBP17.63■□□□□ 0.41
PNKP-230ENST00000638016 A0A0A6YYK5 440 aaPredicted RBP17.62■□□□□ 0.41
PNKP-230ENST00000638016 D6RAR5 112 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 PMPCBO75439 489 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 FGF1P05230 155 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 IVLP07476 585 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 SPINT3P49223 89 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 TEX44Q53QW1 395 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 ZNF648Q5T619 568 aaPredicted RBP17.62■□□□□ 0.41
PNKP-230ENST00000638016 HENMT1Q5T8I9 393 aaKnown RBP17.62■□□□□ 0.41
PNKP-230ENST00000638016 C11orf63Q6NUN7 778 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 AADACL2Q6P093 401 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 ZNF765Q7L2R6 523 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 DAAM2Q86T65 1068 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 CCNJLQ8IV13 435 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 ZDHHC1Q8WTX9 485 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 FGF11Q92914 225 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 COX14Q96I36 57 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 HIC2Q96JB3 615 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 SLC25A51Q9H1U9 297 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 LRRN3Q9H3W5 708 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 POLR1BQ9H9Y6 1135 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 HAUS2Q9NVX0 235 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 KCTD5Q9NXV2 234 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 LRIT1Q9P2V4 623 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 SPO11Q9Y5K1 396 aa17.62■□□□□ 0.41
PNKP-230ENST00000638016 AURKAO14965 403 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 TCEA3O75764 348 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 ECEL1O95672 775 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 HGFP14210 728 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 NFKB1P19838 968 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 ABCG1P45844 678 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 LSSP48449 732 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 ILF3Q12906 894 aaKnown RBP eCLIP17.61■□□□□ 0.41
PNKP-230ENST00000638016 TFDP2Q14188 446 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 PYCR3Q53H96 274 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 TFDP3Q5H9I0 405 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 SPRED1Q7Z699 444 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 NRSN1Q8IZ57 195 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 NAGSQ8N159 534 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 TFB1MQ8WVM0 346 aaKnown RBP17.61■□□□□ 0.41
PNKP-230ENST00000638016 SCARF2Q96GP6 870 aaPredicted RBP17.61■□□□□ 0.41
PNKP-230ENST00000638016 TEKT5Q96M29 485 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 OR2M4Q96R27 311 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 GFM1Q96RP9 751 aaKnown RBP17.61■□□□□ 0.41
PNKP-230ENST00000638016 FAM118BQ9BPY3 351 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 GSDMCQ9BYG8 508 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 EPB41L5Q9HCM4 733 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 TRNAU1APQ9NX07 287 aaKnown RBP17.61■□□□□ 0.41
PNKP-230ENST00000638016 TRIM10Q9UDY6 481 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 ZNF711Q9Y462 761 aa17.61■□□□□ 0.41
PNKP-230ENST00000638016 ZRANB2O95218 330 aaKnown RBP eCLIP17.6■□□□□ 0.41
PNKP-230ENST00000638016 ASMTLO95671 621 aa17.6■□□□□ 0.41
PNKP-230ENST00000638016 EML2O95834 649 aa17.6■□□□□ 0.41
PNKP-230ENST00000638016 GLB1P16278 677 aa17.6■□□□□ 0.41
PNKP-230ENST00000638016 ACTN2P35609 894 aa17.6■□□□□ 0.41
PNKP-230ENST00000638016 ACTR1BP42025 376 aa17.6■□□□□ 0.41
PNKP-230ENST00000638016 CHRNA4P43681 627 aa17.6■□□□□ 0.41
PNKP-230ENST00000638016 ACTR1AP61163 376 aa17.6■□□□□ 0.41
PNKP-230ENST00000638016 CDK18Q07002 472 aa17.6■□□□□ 0.41
PNKP-230ENST00000638016 C17orf82Q86X59 251 aaPredicted RBP17.6■□□□□ 0.41
PNKP-230ENST00000638016 TMEM139Q8IV31 216 aa17.6■□□□□ 0.41
PNKP-230ENST00000638016 GPR26Q8NDV2 337 aa17.6■□□□□ 0.41
PNKP-230ENST00000638016 EXD1Q8NHP7 514 aa17.6■□□□□ 0.41
PNKP-230ENST00000638016 P3H4Q92791 437 aa17.6■□□□□ 0.41
PNKP-230ENST00000638016 ADGRE3Q9BY15 652 aa17.6■□□□□ 0.41
PNKP-230ENST00000638016 FAM83DQ9H4H8 585 aa17.6■□□□□ 0.41
PNKP-230ENST00000638016 PKD2L2Q9NZM6 624 aa17.6■□□□□ 0.41
PNKP-230ENST00000638016 DNPEPQ9ULA0 475 aa17.6■□□□□ 0.41
PNKP-230ENST00000638016 TRBV23OR9-2A0A075B6M9 112 aa17.59■□□□□ 0.41
PNKP-230ENST00000638016 B4GAT1O43505 415 aa17.59■□□□□ 0.41
PNKP-230ENST00000638016 DNAJC6O75061 913 aa17.59■□□□□ 0.41
PNKP-230ENST00000638016 DXOO77932 396 aaKnown RBP17.59■□□□□ 0.41
PNKP-230ENST00000638016 NR2C2P49116 596 aa17.59■□□□□ 0.41
PNKP-230ENST00000638016 OR1D5P58170 312 aa17.59■□□□□ 0.41
PNKP-230ENST00000638016 KDELC1Q6UW63 502 aa17.59■□□□□ 0.41
PNKP-230ENST00000638016 NLRP8Q86W28 1048 aa17.59■□□□□ 0.41
PNKP-230ENST00000638016 ZNF761Q86XN6 746 aaPredicted RBP17.59■□□□□ 0.41
PNKP-230ENST00000638016 TMTC1Q8IUR5 882 aa17.59■□□□□ 0.41
PNKP-230ENST00000638016 SPACA3Q8IXA5 215 aa17.59■□□□□ 0.41
PNKP-230ENST00000638016 RCOR2Q8IZ40 523 aa17.59■□□□□ 0.41
PNKP-230ENST00000638016 ZNF567Q8N184 647 aa17.59■□□□□ 0.41
PNKP-230ENST00000638016 ARL14Q8N4G2 192 aa17.59■□□□□ 0.41
PNKP-230ENST00000638016 KIAA1524Q8TCG1 905 aa17.59■□□□□ 0.41
PNKP-230ENST00000638016 OXNAD1Q96HP4 312 aaPredicted RBP17.59■□□□□ 0.41
PNKP-230ENST00000638016 QKIQ96PU8 341 aaKnown RBP eCLIP17.59■□□□□ 0.41
PNKP-230ENST00000638016 DESI2Q9BSY9 194 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms