RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 SPDYE7PQ495Y7 208 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 FBXO43Q4G163 708 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 PKDCCQ504Y2 493 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 C6orf10Q5SRN2 563 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 DCAF12L1Q5VU92 463 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 LIPMQ5VYY2 423 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 ZNF776Q68DI1 518 aaPredicted RBP5.51□□□□□ -1.53
CHD2-227ENST00000637572 PRMT9Q6P2P2 845 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 SNX20Q7Z614 316 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 ZNF276Q8N554 614 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 LRRN4CLQ8ND94 238 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 FLCNQ8NFG4 579 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 HSH2DQ96JZ2 352 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 ZSCAN5AQ9BUG6 496 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 ACE2Q9BYF1 805 aaPredicted RBP5.51□□□□□ -1.53
CHD2-227ENST00000637572 TCF7L2Q9NQB0 619 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 SNX15Q9NRS6 342 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 PIH1D1Q9NWS0 290 aaKnown RBP5.51□□□□□ -1.53
CHD2-227ENST00000637572 NCDNQ9UBB6 729 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.51□□□□□ -1.53
CHD2-227ENST00000637572 IL36AQ9UHA7 158 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 KCNE2Q9Y6J6 123 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 C15orf38-AP3S2A0A0A6YYH1 394 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 A0A1W2PPC1 479 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 KLHL33A6NCF5 533 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 MGAT4DA6NG13 374 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 URADA6NGE7 173 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 A6NJY4 79 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 DCLK1O15075 740 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 UBDO15205 165 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 RNASEH2AO75792 299 aaKnown RBP5.51□□□□□ -1.53
CHD2-227ENST00000637572 BEST1O76090 585 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 ADH1BP00325 375 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 CTPS1P17812 591 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 TFEBP19484 476 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 BGNP21810 368 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 CALB2P22676 271 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 HOXC8P31273 242 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 HSD17B2P37059 387 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 SLC26A3P40879 764 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 RPL14P50914 215 aaKnown RBP5.51□□□□□ -1.53
CHD2-227ENST00000637572 DEFB103AP81534 67 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 SLC7A9P82251 487 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 HSPA14Q0VDF9 509 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 SLC14A2Q15849 920 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 TRIM71Q2Q1W2 868 aaKnown RBP5.51□□□□□ -1.53
CHD2-227ENST00000637572 MYLK3Q32MK0 819 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 ARPINQ7Z6K5 226 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 RAVER1Q8IY67 606 aaKnown RBP5.51□□□□□ -1.53
CHD2-227ENST00000637572 METTL6Q8TCB7 284 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 ZNF75CPQ92670 426 aaPredicted RBP5.51□□□□□ -1.53
CHD2-227ENST00000637572 CXorf40BQ96DE9 158 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 CNDP1Q96KN2 507 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 CCDC3Q9BQI4 270 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 SPATS2LQ9NUQ6 558 aaKnown RBP5.51□□□□□ -1.53
CHD2-227ENST00000637572 CYTH4Q9UIA0 394 aa5.51□□□□□ -1.53
CHD2-227ENST00000637572 SPTAN1Q13813 2472 aaKnown RBP5.51□□□□□ -1.53
CHD2-227ENST00000637572 SERTM1A2A2V5 107 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 TXNDC9O14530 226 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 CDK14O94921 469 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 PRAMEF1O95521 474 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 HLA-DQB2P05538 268 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 IDSP22304 550 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 AKT2P31751 481 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 PSMD8P48556 350 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 AQP5P55064 265 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 CRADDP78560 199 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 CNTN1Q12860 1018 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 DPYSQ14117 519 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 KCNJ11Q14654 390 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 SHHQ15465 462 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 TEAD4Q15561 434 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 PHKG1Q16816 387 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 PITRM1Q5JRX3 1037 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 C22orf39Q6P5X5 142 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 LINGO4Q6UY18 593 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 TPRG1Q6ZUI0 275 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 CYS1Q717R9 158 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 KBTBD6Q86V97 674 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 LRRTM3Q86VH5 581 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 TRIML2Q8N7C3 387 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 PIWIL2Q8TC59 973 aaKnown RBP5.5□□□□□ -1.53
CHD2-227ENST00000637572 KLHL32Q96NJ5 620 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 HGH1Q9BTY7 390 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 NKX2-4Q9H2Z4 354 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 CYP4F12Q9HCS2 524 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 INTS7Q9NVH2 962 aaKnown RBP5.5□□□□□ -1.53
CHD2-227ENST00000637572 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.5□□□□□ -1.53
CHD2-227ENST00000637572 SPASTQ9UBP0 616 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 PPT2Q9UMR5 302 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 PCDHGC4Q9Y5F7 938 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 HEBP2Q9Y5Z4 205 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.5□□□□□ -1.53
CHD2-227ENST00000637572 NCF1BA6NI72 391 aaPredicted RBP5.5□□□□□ -1.53
CHD2-227ENST00000637572 NCF1CA8MVU1 366 aaPredicted RBP5.5□□□□□ -1.53
CHD2-227ENST00000637572 MEI4A8MW99 385 aa5.5□□□□□ -1.53
CHD2-227ENST00000637572 PHGDHO43175 533 aaKnown RBP5.5□□□□□ -1.53
CHD2-227ENST00000637572 NCF1P14598 390 aaPredicted RBP5.5□□□□□ -1.53
CHD2-227ENST00000637572 HOXB1P14653 301 aaPredicted RBP5.5□□□□□ -1.53
CHD2-227ENST00000637572 PSMC3P17980 439 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms