RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 NRROSQ86YC3 692 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 CNTD1Q8N815 330 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 TC2NQ8N9U0 490 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 TMEM159Q96B96 161 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 CRELD1Q96HD1 420 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 OLFM3Q96PB7 478 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 SRPK1Q96SB4 655 aaKnown RBP18.85■□□□□ 0.61
CLN6-221ENST00000637494 CEP41Q9BYV8 373 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 FOXP3Q9BZS1 431 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 SLC25A51Q9H1U9 297 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 AKAP7Q9P0M2 348 aaPredicted RBP18.85■□□□□ 0.61
CLN6-221ENST00000637494 VPS18Q9P253 973 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 ALG6Q9Y672 507 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 KLK10O43240 276 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 MTSS1O43312 755 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 ECEL1O95672 775 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 SOD1P00441 154 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 FUCA1P04066 466 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 ITGA2BP08514 1039 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 ALDH4A1P30038 563 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 PDX1P52945 283 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 MAZP56270 477 aaKnown RBP18.84■□□□□ 0.61
CLN6-221ENST00000637494 TMPRSS3P57727 454 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 CXADRP78310 365 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 TLE3Q04726 772 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 GALNT3Q14435 633 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 IHHQ14623 411 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 SLC14A2Q15849 920 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 PCSK7Q16549 785 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 GPR155Q7Z3F1 870 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 KDELC2Q7Z4H8 507 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 TRIM74Q86UV6 250 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 PIM3Q86V86 326 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 CCDC50Q8IVM0 306 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 TFB1MQ8WVM0 346 aaKnown RBP18.84■□□□□ 0.61
CLN6-221ENST00000637494 P3H4Q92791 437 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 IMP4Q96G21 291 aaKnown RBP18.84■□□□□ 0.61
CLN6-221ENST00000637494 SCARF2Q96GP6 870 aaPredicted RBP18.84■□□□□ 0.61
CLN6-221ENST00000637494 UBL7Q96S82 380 aaPredicted RBP18.84■□□□□ 0.61
CLN6-221ENST00000637494 PRORYQ9H606 182 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 ZFYVE1Q9HBF4 777 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 ZNHIT2Q9UHR6 403 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 ASXL3Q9C0F0 2248 aa18.84■□□□□ 0.61
CLN6-221ENST00000637494 DSPP15924 2871 aaKnown RBP18.83■□□□□ 0.61
CLN6-221ENST00000637494 A0A0A6YYK5 440 aaPredicted RBP18.83■□□□□ 0.6
CLN6-221ENST00000637494 CST8O60676 142 aa18.83■□□□□ 0.6
CLN6-221ENST00000637494 ZRANB2O95218 330 aaKnown RBP eCLIP18.83■□□□□ 0.6
CLN6-221ENST00000637494 CDKN2BP42772 138 aa18.83■□□□□ 0.6
CLN6-221ENST00000637494 PPM1FP49593 454 aaPredicted RBP18.83■□□□□ 0.6
CLN6-221ENST00000637494 CDK18Q07002 472 aa18.83■□□□□ 0.6
CLN6-221ENST00000637494 CLPPQ16740 277 aaPredicted RBP18.83■□□□□ 0.6
CLN6-221ENST00000637494 PYCR3Q53H96 274 aa18.83■□□□□ 0.6
CLN6-221ENST00000637494 TEX44Q53QW1 395 aa18.83■□□□□ 0.6
CLN6-221ENST00000637494 TFDP3Q5H9I0 405 aa18.83■□□□□ 0.6
CLN6-221ENST00000637494 SPOCD1Q6ZMY3 1216 aa18.83■□□□□ 0.6
CLN6-221ENST00000637494 B3GNT8Q7Z7M8 397 aa18.83■□□□□ 0.6
CLN6-221ENST00000637494 JAMLQ86YT9 394 aa18.83■□□□□ 0.6
CLN6-221ENST00000637494 RCOR2Q8IZ40 523 aa18.83■□□□□ 0.6
CLN6-221ENST00000637494 COX14Q96I36 57 aa18.83■□□□□ 0.6
CLN6-221ENST00000637494 RBM41Q96IZ5 413 aaKnown RBP18.83■□□□□ 0.6
CLN6-221ENST00000637494 CALR3Q96L12 384 aaKnown RBP18.83■□□□□ 0.6
CLN6-221ENST00000637494 AGAP2Q99490 1192 aa18.83■□□□□ 0.6
CLN6-221ENST00000637494 CMKLR1Q99788 373 aa18.83■□□□□ 0.6
CLN6-221ENST00000637494 GPR63Q9BZJ6 419 aa18.83■□□□□ 0.6
CLN6-221ENST00000637494 RMI1Q9H9A7 625 aa18.83■□□□□ 0.6
CLN6-221ENST00000637494 GLOD4Q9HC38 313 aa18.83■□□□□ 0.6
CLN6-221ENST00000637494 ATXN7L1Q9ULK2 861 aaPredicted RBP18.83■□□□□ 0.6
CLN6-221ENST00000637494 PCDHA13Q9Y5I0 950 aa18.83■□□□□ 0.6
CLN6-221ENST00000637494 COL27A1Q8IZC6 1860 aaPredicted RBP18.83■□□□□ 0.6
CLN6-221ENST00000637494 RP1P56715 2156 aa18.82■□□□□ 0.6
CLN6-221ENST00000637494 TEX51A0A1B0GUA7 166 aa18.82■□□□□ 0.6
CLN6-221ENST00000637494 CDRT15L2A8MXV6 281 aa18.82■□□□□ 0.6
CLN6-221ENST00000637494 CASC3O15234 703 aaKnown RBP18.82■□□□□ 0.6
CLN6-221ENST00000637494 LCA5LO95447 670 aa18.82■□□□□ 0.6
CLN6-221ENST00000637494 CPNE6O95741 557 aa18.82■□□□□ 0.6
CLN6-221ENST00000637494 UGT1A5P35504 534 aa18.82■□□□□ 0.6
CLN6-221ENST00000637494 GPR3P46089 330 aa18.82■□□□□ 0.6
CLN6-221ENST00000637494 AMZ1Q400G9 498 aa18.82■□□□□ 0.6
CLN6-221ENST00000637494 PHF19Q5T6S3 580 aa18.82■□□□□ 0.6
CLN6-221ENST00000637494 HENMT1Q5T8I9 393 aaKnown RBP18.82■□□□□ 0.6
CLN6-221ENST00000637494 LYSMD3Q7Z3D4 306 aa18.82■□□□□ 0.6
CLN6-221ENST00000637494 CLEC14AQ86T13 490 aa18.82■□□□□ 0.6
CLN6-221ENST00000637494 C17orf82Q86X59 251 aaPredicted RBP18.82■□□□□ 0.6
CLN6-221ENST00000637494 SFTPA2Q8IWL1 248 aa18.82■□□□□ 0.6
CLN6-221ENST00000637494 PTCD2Q8WV60 388 aaKnown RBP18.82■□□□□ 0.6
CLN6-221ENST00000637494 PRR11Q96HE9 360 aaPredicted RBP18.82■□□□□ 0.6
CLN6-221ENST00000637494 FERMT1Q9BQL6 677 aa18.82■□□□□ 0.6
CLN6-221ENST00000637494 SPATA16Q9BXB7 569 aa18.82■□□□□ 0.6
CLN6-221ENST00000637494 ZMYND15Q9H091 742 aa18.82■□□□□ 0.6
CLN6-221ENST00000637494 STN1Q9H668 368 aaKnown RBP18.82■□□□□ 0.6
CLN6-221ENST00000637494 MAGEE1Q9HCI5 957 aa18.82■□□□□ 0.6
CLN6-221ENST00000637494 LOXL2Q9Y4K0 774 aa18.82■□□□□ 0.6
CLN6-221ENST00000637494 A0A1W2PNU3 283 aaPredicted RBP18.81■□□□□ 0.6
CLN6-221ENST00000637494 SLC4A1P02730 911 aa18.81■□□□□ 0.6
CLN6-221ENST00000637494 ATP1A1P05023 1023 aaKnown RBP18.81■□□□□ 0.6
CLN6-221ENST00000637494 SLC2A4P14672 509 aa18.81■□□□□ 0.6
CLN6-221ENST00000637494 NAP1L1P55209 391 aaKnown RBP18.81■□□□□ 0.6
CLN6-221ENST00000637494 B4GALNT1Q00973 533 aa18.81■□□□□ 0.6
CLN6-221ENST00000637494 PRKD1Q15139 912 aaPredicted RBP18.81■□□□□ 0.6
CLN6-221ENST00000637494 SOWAHCQ53LP3 525 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms