RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 TMEM98Q9Y2Y6 226 aa17.84■□□□□ 0.45
PNKP-225ENST00000636214 ZFC3H1O60293 1989 aaKnown RBP17.83■□□□□ 0.44
PNKP-225ENST00000636214 A0A0U1RQS6 177 aa17.83■□□□□ 0.44
PNKP-225ENST00000636214 TK2O00142 265 aa17.83■□□□□ 0.44
PNKP-225ENST00000636214 KCNK1O00180 336 aa17.83■□□□□ 0.44
PNKP-225ENST00000636214 INPP4BO15327 924 aa17.83■□□□□ 0.44
PNKP-225ENST00000636214 SPOPO43791 374 aa17.83■□□□□ 0.44
PNKP-225ENST00000636214 CLDN7O95471 211 aa17.83■□□□□ 0.44
PNKP-225ENST00000636214 CPNE6O95741 557 aa17.83■□□□□ 0.44
PNKP-225ENST00000636214 RHDQ02161 417 aa17.83■□□□□ 0.44
PNKP-225ENST00000636214 NIPAL4Q0D2K0 466 aa17.83■□□□□ 0.44
PNKP-225ENST00000636214 LRP8Q14114 963 aa17.83■□□□□ 0.44
PNKP-225ENST00000636214 TRIM74Q86UV6 250 aa17.83■□□□□ 0.44
PNKP-225ENST00000636214 NLRP8Q86W28 1048 aa17.83■□□□□ 0.44
PNKP-225ENST00000636214 NRROSQ86YC3 692 aa17.83■□□□□ 0.44
PNKP-225ENST00000636214 RHOT1Q8IXI2 618 aa17.83■□□□□ 0.44
PNKP-225ENST00000636214 LSM14AQ8ND56 463 aaKnown RBP17.83■□□□□ 0.44
PNKP-225ENST00000636214 ARRDC2Q8TBH0 407 aa17.83■□□□□ 0.44
PNKP-225ENST00000636214 CPNE5Q9HCH3 593 aa17.83■□□□□ 0.44
PNKP-225ENST00000636214 SMG1Q96Q15 3661 aaKnown RBP17.82■□□□□ 0.44
PNKP-225ENST00000636214 MGAQ8IWI9 3026 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 PMS2P1A4D2B8 440 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 AKR1B15C9JRZ8 316 aaPredicted RBP17.82■□□□□ 0.44
PNKP-225ENST00000636214 AGRPO00253 132 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 ECEL1O95672 775 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 FGF1P05230 155 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 SLC5A2P31639 672 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 DYNLT1P63172 113 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 IFI35P80217 286 aaPredicted RBP17.82■□□□□ 0.44
PNKP-225ENST00000636214 VAC14Q08AM6 782 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 C19orf57Q0VDD7 668 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 SLC10A2Q12908 348 aaPredicted RBP17.82■□□□□ 0.44
PNKP-225ENST00000636214 CLPPQ16740 277 aaPredicted RBP17.82■□□□□ 0.44
PNKP-225ENST00000636214 LRRC38Q5VT99 294 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 CCDC70Q6NSX1 233 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 RFLNAQ6ZTI6 216 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 BZW1Q7L1Q6 419 aaKnown RBP17.82■□□□□ 0.44
PNKP-225ENST00000636214 SFTPA2Q8IWL1 248 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 PLD5Q8N7P1 536 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 SMIM14Q96QK8 99 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 LYSMD1Q96S90 227 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 CHP1Q99653 195 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 BRD8Q9H0E9 1235 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 STN1Q9H668 368 aaKnown RBP17.82■□□□□ 0.44
PNKP-225ENST00000636214 ZNHIT2Q9UHR6 403 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 PCDHGA7Q9Y5G6 932 aa17.82■□□□□ 0.44
PNKP-225ENST00000636214 RGSL1A5PLK6 1076 aa17.81■□□□□ 0.44
PNKP-225ENST00000636214 ERVH48-1M5A8F1 160 aa17.81■□□□□ 0.44
PNKP-225ENST00000636214 MTA2O94776 668 aa17.81■□□□□ 0.44
PNKP-225ENST00000636214 SOD1P00441 154 aa17.81■□□□□ 0.44
PNKP-225ENST00000636214 PRLP01236 227 aa17.81■□□□□ 0.44
PNKP-225ENST00000636214 HGFP14210 728 aa17.81■□□□□ 0.44
PNKP-225ENST00000636214 TNNT3P45378 269 aaPredicted RBP17.81■□□□□ 0.44
PNKP-225ENST00000636214 GPR3P46089 330 aa17.81■□□□□ 0.44
PNKP-225ENST00000636214 OR1D5P58170 312 aa17.81■□□□□ 0.44
PNKP-225ENST00000636214 SLC9A4Q6AI14 798 aa17.81■□□□□ 0.44
PNKP-225ENST00000636214 CCDC81Q6ZN84 652 aa17.81■□□□□ 0.44
PNKP-225ENST00000636214 NT5DC3Q86UY8 548 aa17.81■□□□□ 0.44
PNKP-225ENST00000636214 PTCD2Q8WV60 388 aaKnown RBP17.81■□□□□ 0.44
PNKP-225ENST00000636214 FAM83DQ9H4H8 585 aa17.81■□□□□ 0.44
PNKP-225ENST00000636214 RAD18Q9NS91 495 aa17.81■□□□□ 0.44
PNKP-225ENST00000636214 VPS18Q9P253 973 aa17.81■□□□□ 0.44
PNKP-225ENST00000636214 INTUQ9ULD6 942 aa17.81■□□□□ 0.44
PNKP-225ENST00000636214 ANKRD66B4E2M5 251 aa17.8■□□□□ 0.44
PNKP-225ENST00000636214 FUCA1P04066 466 aa17.8■□□□□ 0.44
PNKP-225ENST00000636214 NOP2P46087 812 aaKnown RBP17.8■□□□□ 0.44
PNKP-225ENST00000636214 SPINT3P49223 89 aa17.8■□□□□ 0.44
PNKP-225ENST00000636214 MAPK10P53779 464 aa17.8■□□□□ 0.44
PNKP-225ENST00000636214 SKOR1P84550 965 aa17.8■□□□□ 0.44
PNKP-225ENST00000636214 B4GALNT1Q00973 533 aa17.8■□□□□ 0.44
PNKP-225ENST00000636214 ZFP36L1Q07352 338 aaKnown RBP17.8■□□□□ 0.44
PNKP-225ENST00000636214 ZBTB17Q13105 803 aa17.8■□□□□ 0.44
PNKP-225ENST00000636214 QPCTQ16769 361 aa17.8■□□□□ 0.44
PNKP-225ENST00000636214 PYCR3Q53H96 274 aa17.8■□□□□ 0.44
PNKP-225ENST00000636214 TMEM164Q5U3C3 297 aa17.8■□□□□ 0.44
PNKP-225ENST00000636214 ZNF438Q7Z4V0 828 aa17.8■□□□□ 0.44
PNKP-225ENST00000636214 C17orf82Q86X59 251 aaPredicted RBP17.8■□□□□ 0.44
PNKP-225ENST00000636214 RNF25Q96BH1 459 aaPredicted RBP17.8■□□□□ 0.44
PNKP-225ENST00000636214 SCARF2Q96GP6 870 aaPredicted RBP17.8■□□□□ 0.44
PNKP-225ENST00000636214 AHCYL2Q96HN2 611 aaKnown RBP17.8■□□□□ 0.44
PNKP-225ENST00000636214 AGAP3Q96P47 875 aa17.8■□□□□ 0.44
PNKP-225ENST00000636214 AGAP2Q99490 1192 aa17.8■□□□□ 0.44
PNKP-225ENST00000636214 DPYSL5Q9BPU6 564 aa17.8■□□□□ 0.44
PNKP-225ENST00000636214 RDH14Q9HBH5 336 aa17.8■□□□□ 0.44
PNKP-225ENST00000636214 LUC7LQ9NQ29 371 aaKnown RBP17.8■□□□□ 0.44
PNKP-225ENST00000636214 KCNK4Q9NYG8 393 aa17.8■□□□□ 0.44
PNKP-225ENST00000636214 SLC4A1P02730 911 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 SLC2A4P14672 509 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 TFDP2Q14188 446 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 GALNT3Q14435 633 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 PCSK7Q16549 785 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 ZNF569Q5MCW4 686 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 USP53Q70EK8 1073 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 KDELC2Q7Z4H8 507 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 SLITRK4Q8IW52 837 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 NAGSQ8N159 534 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 CCDC112Q8NEF3 446 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 PATE1Q8WXA2 126 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 COX14Q96I36 57 aa17.79■□□□□ 0.44
PNKP-225ENST00000636214 CCNL2Q96S94 520 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms