RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 KIAA1143Q96AT1 154 aaPredicted RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 TMEM117Q9H0C3 514 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 FN3KQ9H479 309 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 PLEKHA3Q9HB20 300 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 TIGARQ9NQ88 270 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 SDHAF3Q9NRP4 125 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 THAP1Q9NVV9 213 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 TRHDEQ9UKU6 1024 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 NENFQ9UMX5 172 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 KCNE2Q9Y6J6 123 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 ZGRF1Q86YA3 2104 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 FANCMQ8IYD8 2048 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 E2F8A0AVK6 867 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 C2orf78A6NCI8 922 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 CST8O60676 142 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 GNAO1P09471 354 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 YY1P25490 414 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 PTPN5P54829 565 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 RAB4BP61018 213 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 TMEM62Q0P6H9 643 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 CUL2Q13617 745 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 PON3Q15166 354 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 C12orf40Q86WS4 652 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 ARL10Q8N8L6 244 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 MFSD8Q8NHS3 518 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 NMD3Q96D46 503 aaKnown RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 FCRL4Q96PJ5 515 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 ANTXR1Q9H6X2 564 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 POU2F3Q9UKI9 436 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 ATXN2Q99700 1313 aaKnown RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF335Q9H4Z2 1342 aaPredicted RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 SHOXO15266 292 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 TGM6O95932 706 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 OTCP00480 354 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 PRKAR1BP31321 381 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 MATKP42679 507 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 SLC26A2P50443 739 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 HSD17B7P56937 341 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 MYL6P60660 151 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 MC1RQ01726 317 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 PMPCAQ10713 525 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 ITPK1Q13572 414 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 E2F2Q14209 437 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 CBX2Q14781 532 aaPredicted RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 SLC30A10Q6XR72 485 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 PTCHD4Q6ZW05 846 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 SEC14L1Q92503 715 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 NXNL1Q96CM4 212 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 RBM18Q96H35 190 aaKnown RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 SP140LQ9H930 580 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 UNKLQ9H9P5 680 aaKnown RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 SPON1Q9HCB6 807 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 BARHL2Q9NY43 387 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 DNMT3AQ9Y6K1 912 aaPredicted RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 KIF13AQ9H1H9 1805 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 RIC1Q4ADV7 1423 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 CDK5RAP2Q96SN8 1893 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 TP53BP1Q12888 1972 aaPredicted RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 SLC30A4O14863 429 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 FGF10O15520 208 aaPredicted RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 SUV39H1O43463 412 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 CYP11B1P15538 503 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 HCAR3P49019 387 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 ACADVLP49748 655 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 FXR2P51116 673 aaKnown RBP eCLIP6□□□□□ -1.45
SCN1A-212ENST00000636194 PLGLAQ15195 96 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF484Q5JVG2 852 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 IDNKQ5T6J7 187 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 TTLL10Q6ZVT0 673 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 SLC30A8Q8IWU4 369 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 OR8H3Q8N146 312 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF433Q8N7K0 673 aaPredicted RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 STOML3Q8TAV4 291 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 KLHL6Q8WZ60 621 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 DGCR6LQ9BY27 220 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 CADM1Q9BY67 442 aaKnown RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 ELOVL4Q9GZR5 314 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 IGFLR1Q9H665 355 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 PARPBPQ9NWS1 579 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 GDAP2Q9NXN4 497 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 SEC14L3Q9UDX4 400 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 ZMYM5Q9UJ78 669 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 RFX7Q2KHR2 1363 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 RENP00797 406 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 COL6A1P12109 1028 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 CTHP32929 405 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 MLIPQ5VWP3 458 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 FAM173BQ6P4H8 233 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 SLITRK4Q8IW52 837 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 DAGLBQ8NCG7 672 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 EYA1Q99502 592 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 SSX3Q99909 188 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 DNAJC5Q9H3Z4 198 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 ABCB10Q9NRK6 738 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 METTL5Q9NRN9 209 aaKnown RBP6□□□□□ -1.45
SCN1A-212ENST00000636194 TMEM260Q9NX78 707 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF451Q9Y4E5 1061 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 SPEF2Q9C093 1822 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 CAPN8A6NHC0 703 aa6□□□□□ -1.45
SCN1A-212ENST00000636194 IL33O95760 270 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms