RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 TBL1XO60907 577 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 POP4O95707 220 aaKnown RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ESRRBO95718 433 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 S1PR4O95977 384 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 CATP04040 527 aaKnown RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 MPSTP25325 297 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 NSG1P42857 185 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ABRQ12979 859 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 SP140Q13342 867 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 KHDC1Q4VXA5 237 aaKnown RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 DDX53Q86TM3 631 aaKnown RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ZNF280BQ86YH2 543 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 OR4K2Q8NGD2 314 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 SKA2Q8WVK7 121 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 PDLIM5Q96HC4 596 aaKnown RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 CEP44Q9C0F1 390 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 RAD21L1Q9H4I0 556 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ASB8Q9H765 288 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ZBTB26Q9HCK0 441 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 PCDHGB4Q9UN71 923 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 SCN4AP35499 1836 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ZNF236Q9UL36 1845 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ZNF840PA6NDX5 716 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ANKRD66B4E2M5 251 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 TK2O00142 265 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 C1QAP02745 245 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 IRF1P10914 325 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 PRPS2P11908 318 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 RAG1P15918 1043 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ZNF37AP17032 561 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 AP1S2P56377 157 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 MPP1Q00013 466 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 TYSND1Q2T9J0 566 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 RFX4Q33E94 735 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 KIAA0319Q5VV43 1072 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 OGFOD2Q6N063 350 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 MYLK4Q86YV6 388 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 DENND6AQ8IWF6 608 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 PHF21BQ96EK2 531 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 PPP1R16AQ96I34 528 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 SARS2Q9NP81 518 aaKnown RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 NUDT5Q9UKK9 219 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 SLC27A5Q9Y2P5 690 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ZBBXA8MT70 800 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 AKAP10O43572 662 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 MGEA5O60502 916 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 SYNCRIPO60506 623 aaKnown RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 TULP3O75386 442 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 AP2A2O94973 939 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 C8GP07360 202 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 FMO4P31512 558 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 EEFSECP57772 596 aaKnown RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 CHRNB3Q05901 458 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 USP4Q13107 963 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 RAB6CQ53S08 254 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ZSCAN18Q8TBC5 510 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 MAELQ96JY0 434 aaKnown RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ZNF641Q96N77 438 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 RAB6CQ9H0N0 254 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 CYP4F12Q9HCS2 524 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 TMPRSS4Q9NRS4 437 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 TMLHEQ9NVH6 421 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ENO4A6NNW6 628 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 IGLV3-27P01718 113 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 HMGCLP35914 325 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ARCN1P48444 511 aaKnown RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 MAXP61244 160 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ACCSLQ4AC99 568 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 CLLU1OSQ5K130 101 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 DSELQ8IZU8 1212 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 RCN3Q96D15 328 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 NSMCE2Q96MF7 247 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 PRICKLE1Q96MT3 831 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-210ENST00000635776 SLC2A11Q9BYW1 496 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 ENOPH1Q9UHY7 261 aa4.54□□□□□ -1.68
SCN1A-210ENST00000635776 SLC16A5O15375 505 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 UPP2O95045 317 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 MATN4O95460 622 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 PSMC3P17980 439 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ERVK-8P63133 956 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 DLG1Q12959 904 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 CCSAPQ6IQ19 270 aaPredicted RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 NATD1Q8N6N6 113 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ARRDC2Q8TBH0 407 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ZUFSPQ96AP4 578 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 EBF4Q9BQW3 602 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ELOVL6Q9H5J4 265 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ZDHHC7Q9NXF8 308 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 EMCNQ9ULC0 261 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 AP1M2Q9Y6Q5 423 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 KLHL33A6NCF5 533 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 TMEM247A6NEH6 219 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 CCDC154A6NI56 674 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 H7C0S8 307 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ZBTB14O43829 449 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ULK1O75385 1050 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 GSRP00390 522 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 PFKFB4Q16877 469 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 CTC1Q2NKJ3 1217 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ZNF678Q5SXM1 525 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms