RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 VPS39Q96JC1 886 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 TBATAQ96M53 351 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 EPN3Q9H201 632 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 RABEP2Q9H5N1 569 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 ATP13A3Q9H7F0 1226 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 ECT2Q9H8V3 914 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 CAB39LQ9H9S4 337 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 RIMKLBQ9ULI2 386 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 ERVW-1Q9UQF0 538 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 SLC27A6Q9Y2P4 619 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 SPTBN2O15020 2390 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 SPAG17Q6Q759 2223 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 CCDC162PA2VCL2 907 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 C2orf81A6NN90 581 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 SRRM3A6NNA2 597 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 COPEO14579 308 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 TM9SF1O15321 606 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 SLC7A4O43246 635 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 HAUS5O94927 633 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 GSRP00390 522 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 ATP5BP06576 529 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 ALPIP09923 528 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 PRSS56P0CW18 603 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 SERPINA4P29622 427 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 GRIA4P48058 902 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 CCNHP51946 323 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 RPL26P61254 145 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 TMPRSS15P98073 1019 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 RAD51Q06609 339 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 GRM3Q14832 879 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 TAF1AQ15573 450 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 DLG2Q15700 870 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 GLIPR1L2Q4G1C9 344 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 USP39Q53GS9 565 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 Q6ZVU0 165 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 CILP2Q8IUL8 1156 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 CHST14Q8NCH0 376 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 OR2A12Q8NGT7 310 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 OR6P1Q8NGX9 317 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 GDAP1Q8TB36 358 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 ACMSDQ8TDX5 336 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 CKAP2Q8WWK9 683 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 SRPK1Q96SB4 655 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 GPR22Q99680 433 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 CIPCQ9C0C6 399 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 IQCGQ9H095 443 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 DUSP15Q9H1R2 295 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 RHOJQ9H4E5 214 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 MTG2Q9H4K7 406 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 PCMTD2Q9NV79 361 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 NLE1Q9NVX2 485 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 HACD3Q9P035 362 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 HECAQ9UBI9 543 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 EMCNQ9ULC0 261 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 RPL26L1Q9UNX3 145 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 TTC34A8MYJ7 566 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 BNIP3LO60238 219 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 GOT2P00505 430 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 ASLP04424 464 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 CTPS1P17812 591 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 OPRD1P41143 372 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 ABL2P42684 1182 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 RECQLP46063 649 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 PXNP49023 591 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 VASPP50552 380 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 MYLK3Q32MK0 819 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 CNSTQ6PJW8 725 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 LVRNQ6Q4G3 990 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 KIAA0408Q6ZU52 694 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 PTAR1Q7Z6K3 402 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 LDB1Q86U70 411 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 LMNTD2Q8IXW0 634 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 OTUD6BQ8N6M0 293 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 OR4K2Q8NGD2 314 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 SPOCK2Q92563 424 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 CDKN2AIPNLQ96HQ2 116 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 TUBGCP5Q96RT8 1024 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 CPEB1Q9BZB8 566 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 SNX15Q9NRS6 342 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 POLR3BQ9NW08 1133 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 DEC1Q9P2X7 70 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 FBXO5Q9UKT4 447 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 HCN2Q9UL51 889 aa9.48□□□□□ -0.89
PDLIM5-223ENST00000627587 PLXNA2O75051 1894 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 A0A0J9YYE9 177 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 WASH3PC4AMC7 463 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 GAPDHSO14556 408 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 POP4O95707 220 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 S1PR4O95977 384 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 TRBC1P01850 177 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 PROS1P07225 676 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 CTSLP07711 333 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 LPOP22079 712 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 TYK2P29597 1187 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 CRHR1P34998 444 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 HADHAP40939 763 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 DPP6P42658 865 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 LEPRP48357 1165 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 CCT5P48643 541 aa9.47□□□□□ -0.89
PDLIM5-223ENST00000627587 SERPINB8P50452 374 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms