RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CACNG1Q06432 222 aa17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 CHRNA6Q15825 494 aa17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 ADGRD1Q6QNK2 874 aa17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 PACS1Q6VY07 963 aa17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 TECPR1Q7Z6L1 1165 aa17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 SDCCAG8Q86SQ7 713 aaPredicted RBP17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 LDB1Q86U70 411 aaPredicted RBP17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 TDRPQ86YL5 185 aa17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 CILP2Q8IUL8 1156 aa17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 GOLGA6L1Q8N7Z2 621 aa17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 C2CD4AQ8NCU7 369 aaPredicted RBP17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 GPR150Q8NGU9 434 aa17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 FAM83DQ9H4H8 585 aa17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 PLXNB3Q9ULL4 1909 aa17.74■□□□□ 0.43
PTCHD3-202ENST00000622555 GPR39O43194 453 aa17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 RECQL5O94762 991 aaPredicted RBP17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 GM2AP17900 193 aa17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 OGNP20774 298 aaKnown RBP17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 PMLP29590 882 aa17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 GP5P40197 560 aa17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 CDKN1CP49918 316 aaPredicted RBP17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 DCDC1P59894 354 aa17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 SEMA3AQ14563 771 aa17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 TMED2Q15363 201 aa17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 CWF19L1Q69YN2 538 aaKnown RBP17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 PSAPL1Q6NUJ1 521 aa17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 TAS2R42Q7RTR8 314 aa17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 NRSN1Q8IZ57 195 aa17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 RIBC1Q8N443 379 aaPredicted RBP17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 SCAMP4Q969E2 229 aa17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 DTD2Q96FN9 168 aa17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 SPATA16Q9BXB7 569 aa17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 CDH19Q9H159 772 aa17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 ASB8Q9H765 288 aa17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 ITM2CQ9NQX7 267 aa17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 EBF1Q9UH73 591 aa17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 ZNF180Q9UJW8 692 aa17.73■□□□□ 0.43
PTCHD3-202ENST00000622555 TBC1D3DA0A087WVF3 549 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 TBC1D3IA0A087WXS9 549 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 TBC1D3EA0A087X179 549 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 TBC1D3KA0A087X1G2 549 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 TBC1D3FA6NER0 549 aaPredicted RBP17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 IGLON5A6NGN9 336 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 TBC1D3LB9A6J9 549 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 RGS16O15492 202 aaPredicted RBP17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 APBB3O95704 486 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 TBC1D3HP0C7X1 549 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 NFATC2Q13469 925 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 TBC1D3GQ6DHY5 549 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 TBC1D3CQ6IPX1 549 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 KIAA0408Q6ZU52 694 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 CYP2U1Q7Z449 544 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 SNX20Q7Z614 316 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 RAVER1Q8IY67 606 aaKnown RBP17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 PIANPQ8IYJ0 282 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 TBC1D3Q8IZP1 549 aaPredicted RBP17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 PNPLA1Q8N8W4 532 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 ZNF398Q8TD17 642 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 NUS1Q96E22 293 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 IER2Q9BTL4 223 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 RIOK2Q9BVS4 552 aaKnown RBP17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 ABCG8Q9H221 673 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 PREBQ9HCU5 417 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 FBXO6Q9NRD1 293 aaPredicted RBP17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 USP36Q9P275 1121 aaKnown RBP17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 NFKBIL1Q9UBC1 381 aaPredicted RBP17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 FAM47DPA6NHR8 397 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 TM7SF2O76062 418 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 UGT1A6P19224 532 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 UGT1A1P22309 533 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 UGT1A4P22310 534 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 UGT1A3P35503 534 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 UGT1A5P35504 534 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 ABCG1P45844 678 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 SERPINB9P50453 376 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 CSE1LP55060 971 aaKnown RBP17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 RASA2Q15283 850 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 ZNF284Q2VY69 593 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 AARS2Q5JTZ9 985 aaKnown RBP17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 TMEM31Q5JXX7 168 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 GRTP1Q5TC63 336 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 SEL1L3Q68CR1 1132 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 TAOK1Q7L7X3 1001 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 AP2M1Q96CW1 435 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 ATXN7L3BQ96GX2 97 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 RBBP8Q99708 897 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 BTBD1Q9H0C5 482 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 TMBIM4Q9HC24 238 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 EURLQ9NYK6 297 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 LGALS13Q9UHV8 139 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 CRLS1Q9UJA2 301 aa17.72■□□□□ 0.43
PTCHD3-202ENST00000622555 PI15O43692 258 aa17.71■□□□□ 0.43
PTCHD3-202ENST00000622555 RNGTTO60942 597 aaKnown RBP17.71■□□□□ 0.43
PTCHD3-202ENST00000622555 S1PR4O95977 384 aa17.71■□□□□ 0.43
PTCHD3-202ENST00000622555 AHSGP02765 367 aa17.71■□□□□ 0.43
PTCHD3-202ENST00000622555 GABRB3P28472 473 aa17.71■□□□□ 0.43
PTCHD3-202ENST00000622555 MAGEA9P43362 315 aa17.71■□□□□ 0.43
PTCHD3-202ENST00000622555 CXCL12P48061 93 aa17.71■□□□□ 0.43
PTCHD3-202ENST00000622555 RPS21P63220 83 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms