RNA–Protein interactions for RNA: ENST00000622329.1

RNU6-538P-201, Transcript of RNA, U6 small nuclear 538, pseudogene, humanhuman

BASIC

Gene RNU6-538P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-538P-201ENST00000622329 EFTUD2Q15029 972 aaKnown RBP eCLIP5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 CCDC57Q2TAC2 916 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 CFAP221Q4G0U5 840 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 KCTD21Q4G0X4 260 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 GLE1Q53GS7 698 aaKnown RBP5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 TCTE1Q5JU00 501 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 ARHGAP40Q5TG30 622 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 ATG9BQ674R7 924 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 NAIF1Q69YI7 327 aaPredicted RBP5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 SLC9A4Q6AI14 798 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 TSSK4Q6SA08 328 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 TOM1L2Q6ZVM7 507 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 C1orf186Q6ZWK4 172 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 KRT27Q7Z3Y8 459 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 CLEC14AQ86T13 490 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 ZNF280BQ86YH2 543 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 MFN1Q8IWA4 741 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 CFAP206Q8IYR0 622 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 SPARTQ8N0X7 666 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 BATF2Q8N1L9 274 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 SIRT6Q8N6T7 355 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 C11orf65Q8NCR3 313 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 BBOF1Q8ND07 529 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 OR52E1Q8NGJ3 308 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 DNAJB14Q8TBM8 379 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 LRRC8CQ8TDW0 803 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 PSPC1Q8WXF1 523 aaKnown RBP5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 C14orf79Q96F83 325 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 ELMOD3Q96FG2 381 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 FAR2Q96K12 515 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 PHACTR3Q96KR7 559 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 RMDN2Q96LZ7 410 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 SLC46A1Q96NT5 459 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 MYOCQ99972 504 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 C17orf80Q9BSJ5 609 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 INPP5KQ9BT40 448 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 NDC1Q9BTX1 674 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 TPPP3Q9BW30 176 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 TLR10Q9BXR5 811 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 OSBPL8Q9BZF1 889 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 RTN4RQ9BZR6 473 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 CCSER1Q9C0I3 900 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 POLR1EQ9GZS1 481 aaKnown RBP5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 AKIRIN1Q9H9L7 192 aaPredicted RBP5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 KCNK9Q9NPC2 374 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 IL23AQ9NPF7 189 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 RPRD1BQ9NQG5 326 aaKnown RBP5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 FAM114A2Q9NRY5 505 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 FBXO28Q9NVF7 368 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 FAM118AQ9NWS6 357 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 SMPD3Q9NY59 655 aaPredicted RBP5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 HAO2Q9NYQ3 351 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 STK26Q9P289 416 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 PTGFRNQ9P2B2 879 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 PEMTQ9UBM1 199 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 SLC23A1Q9UHI7 598 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 MAD2L2Q9UI95 211 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 TRMT6Q9UJA5 497 aaKnown RBP5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 RAB21Q9UL25 225 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 DDX49Q9Y6V7 483 aaKnown RBP5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 ACEP12821 1306 aa5.41□□□□□ -1.54
RNU6-538P-201ENST00000622329 FAM230AA0A1W2PPH8 454 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 NCF1BA6NI72 391 aaPredicted RBP5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 NCF1CA8MVU1 366 aaPredicted RBP5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 GRM8O00222 908 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 EBAG9O00559 213 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 MTX2O75431 263 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 PRDM1O75626 825 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 IDH1O75874 414 aaKnown RBP5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 SEC31AO94979 1220 aaKnown RBP5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 SCAF4O95104 1147 aaKnown RBP5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 TRUB2O95900 331 aaKnown RBP5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 ITGB1P05556 798 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 ENO1P06733 434 aaKnown RBP5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 GALTP07902 379 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 VIMP08670 466 aaKnown RBP5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 ATXN1LP0C7T5 689 aaKnown RBP5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 AREGP15514 252 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 ATP5JP18859 108 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 CD27P26842 260 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 ALDH4A1P30038 563 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 NTSR1P30989 418 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 CCR1P32246 355 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 TAGLN2P37802 199 aaKnown RBP5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 USP8P40818 1118 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 PTGER3P43115 390 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 KCNJ1P48048 391 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 NDUFV1P49821 464 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 PGDP52209 483 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 DGKEP52429 567 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 METAP1P53582 386 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 MVDP53602 400 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 RPL15P61313 204 aaKnown RBP5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 ACY1Q03154 408 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 OVGP1Q12889 678 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 ABRQ12979 859 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 TRDNQ13061 729 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 PLD1Q13393 1074 aa5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 KARSQ15046 597 aaKnown RBP5.4□□□□□ -1.54
RNU6-538P-201ENST00000622329 CYP2A13Q16696 494 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms