RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 PDK3Q15120 406 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 SKIV2LQ15477 1246 aaKnown RBP17.43■□□□□ 0.38
FAM3A-222ENST00000621967 CCDC85BQ15834 202 aaPredicted RBP17.43■□□□□ 0.38
FAM3A-222ENST00000621967 CES5AQ6NT32 575 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 SYCE2Q6PIF2 218 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 UGT2A3Q6UWM9 527 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 GAREM2Q75VX8 874 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 MARVELD2Q8N4S9 558 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 ZFAND2BQ8WV99 257 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 TADA1Q96BN2 335 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 CDK5RAP1Q96SZ6 601 aaKnown RBP17.43■□□□□ 0.38
FAM3A-222ENST00000621967 EML4Q9HC35 981 aaKnown RBP17.43■□□□□ 0.38
FAM3A-222ENST00000621967 NT5MQ9NPB1 228 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.43■□□□□ 0.38
FAM3A-222ENST00000621967 EYSQ5T1H1 3165 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 CAPN8A6NHC0 703 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 PAPLNO95428 1278 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 SLC26A3P40879 764 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 NTHL1P78549 312 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 DLX2Q07687 328 aaPredicted RBP17.43■□□□□ 0.38
FAM3A-222ENST00000621967 IHHQ14623 411 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 LIN52Q52LA3 116 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 HECTD3Q5T447 861 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 THEMIS2Q5TEJ8 643 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 HECTD2Q5U5R9 776 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 KLC3Q6P597 504 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 GPR149Q86SP6 731 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 TMEM150AQ86TG1 271 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 AFAP1L2Q8N4X5 818 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 TEX26Q8N6G2 289 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 BHLHE22Q8NFJ8 381 aaPredicted RBP17.43■□□□□ 0.38
FAM3A-222ENST00000621967 USP13Q92995 863 aaPredicted RBP17.43■□□□□ 0.38
FAM3A-222ENST00000621967 HMCESQ96FZ2 354 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 MFSD1Q9H3U5 465 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 TRPC7Q9HCX4 862 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 TNFRSF12AQ9NP84 129 aa17.43■□□□□ 0.38
FAM3A-222ENST00000621967 XIRP2A4UGR9 3374 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 IGLV3-10A0A075B6K4 115 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 STX16-NPEPL1H3BU86 382 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 J3KR12 359 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 ZNF197O14709 1029 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 CFLARO15519 480 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 PENKP01210 267 aaPredicted RBP17.42■□□□□ 0.38
FAM3A-222ENST00000621967 CCDC166P0CW27 439 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 CD86P42081 329 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 CYP4F8P98187 520 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 SLC10A7Q0GE19 358 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 PTK2BQ14289 1009 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 SQLEQ14534 574 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 COL19A1Q14993 1142 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 C10orf120Q5SQS8 335 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 CUZD1Q86UP6 607 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 SLC22A9Q8IVM8 553 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 CATSPER1Q8NEC5 780 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 NPAS2Q99743 824 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 ZYG11BQ9C0D3 744 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 CCSER2Q9H7U1 834 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 OLA1Q9NTK5 396 aaKnown RBP17.42■□□□□ 0.38
FAM3A-222ENST00000621967 SARDHQ9UL12 918 aa17.42■□□□□ 0.38
FAM3A-222ENST00000621967 MRPS23Q9Y3D9 190 aaKnown RBP17.42■□□□□ 0.38
FAM3A-222ENST00000621967 SPTBN5Q9NRC6 3674 aaKnown RBP17.42■□□□□ 0.38
FAM3A-222ENST00000621967 TRIM38O00635 465 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 GJA1P17302 382 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 CCR2P41597 374 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 CHN2P52757 468 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 TBX4P57082 545 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 ROR2Q01974 943 aaKnown RBP17.41■□□□□ 0.38
FAM3A-222ENST00000621967 MAPRE2Q15555 327 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 ARHGAP15Q53QZ3 475 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 MS4A13Q5J8X5 152 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 MARC1Q5VT66 337 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 GK5Q6ZS86 529 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 LILRA2Q8N149 483 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 ADCY4Q8NFM4 1077 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 ANKRD49Q8WVL7 239 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 LRGUKQ96M69 825 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 CENPKQ9BS16 269 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 TRMOQ9BU70 441 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 GSTO2Q9H4Y5 243 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 CYP4F12Q9HCS2 524 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 PCDHGA7Q9Y5G6 932 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 C2orf16Q68DN1 1984 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 OBSL1O75147 1896 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 DOCK6Q96HP0 2047 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 S1PR4O95977 384 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 MSX2P35548 267 aaPredicted RBP17.41■□□□□ 0.38
FAM3A-222ENST00000621967 LTBRP36941 435 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 MAXP61244 160 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 DSC2Q02487 901 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 EFEMP1Q12805 493 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 TLR1Q15399 786 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 SLC5A9Q2M3M2 681 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 ALFQ53S48 1182 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 ATAT1Q5SQI0 421 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 TFAP2DQ7Z6R9 452 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 MFN1Q8IWA4 741 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 ASB9Q96DX5 294 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 TCEAL4Q96EI5 215 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 L3HYPDHQ96EM0 354 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 TMA16Q96EY4 203 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms