RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, human

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-229	ENST00000621897	AAR2	Q9Y312	384 aa	Known RBP	4.25	□□□□□ -1.73
BRCA1-229	ENST00000621897	CYP46A1	Q9Y6A2	500 aa		4.25	□□□□□ -1.73
BRCA1-229	ENST00000621897	UTY	O14607	1347 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	ZG16	O60844	167 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	WDHD1	O75717	1129 aa	Predicted RBP	4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	CGA	P01215	116 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	AMBP	P02760	352 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	HILS1	P60008	231 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	CSNK2A1	P68400	391 aa	Predicted RBP	4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	NEXN	Q0ZGT2	675 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	USP41	Q3LFD5	358 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	WDR78	Q5VTH9	848 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	RAD9B	Q6WBX8	426 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	ZNF852	Q6ZMS4	543 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	HEATR4	Q86WZ0	1026 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	ZNF354C	Q86Y25	554 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	NRROS	Q86YC3	692 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	CSNK2A3	Q8NEV1	391 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	OR5R1	Q8NH85	324 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	ZNF583	Q96ND8	569 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	NR1H4	Q96RI1	486 aa	Predicted RBP	4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	SYT17	Q9BSW7	474 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	USP44	Q9H0E7	712 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	KIF9	Q9HAQ2	790 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	PCDHB16	Q9NRJ7	776 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	INTS6	Q9UL03	887 aa	Known RBP	4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	MKLN1	Q9UL63	735 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	NAALADL1	Q9UQQ1	740 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	DLGAP4	Q9Y2H0	992 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	LRRFIP2	Q9Y608	721 aa	Known RBP	4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	CAPN7	Q9Y6W3	813 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	SMCHD1	A6NHR9	2005 aa		4.24	□□□□□ -1.73
BRCA1-229	ENST00000621897	LRRC53	A6NM62	1247 aa		4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	IL7R	P16871	459 aa		4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	CTCF	P49711	727 aa	Predicted RBP	4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	GTF2H2	Q13888	395 aa		4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	DRAP1	Q14919	205 aa	Predicted RBP	4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	C6orf141	Q5SZD1	244 aa		4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	ADAM5	Q6NVV9	412 aa		4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	GTF2H2C	Q6P1K8	395 aa		4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	BRAT1	Q6PJG6	821 aa		4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	KCTD8	Q6ZWB6	473 aa		4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	FAM9B	Q8IZU0	186 aa		4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	CPXCR1	Q8N123	301 aa		4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	ESX1	Q8N693	406 aa		4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	NFKBID	Q8NI38	313 aa		4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	GTF3C6	Q969F1	213 aa		4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	PIGT	Q969N2	578 aa		4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	ZNF501	Q96CX3	271 aa	Predicted RBP	4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	TMEM47	Q9BQJ4	181 aa		4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	AGXT2	Q9BYV1	514 aa		4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	ASAH2	Q9NR71	780 aa		4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	SWAP70	Q9UH65	585 aa		4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	CAMK2A	Q9UQM7	478 aa		4.23	□□□□□ -1.73
BRCA1-229	ENST00000621897	WDR1	O75083	606 aa		4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	NR1D1	P20393	614 aa		4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	PIP4K2A	P48426	406 aa	Predicted RBP	4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	TAS2R38	P59533	333 aa		4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	FOXM1	Q08050	763 aa		4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	ZNF234	Q14588	700 aa		4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	GSTA3	Q16772	222 aa		4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	CEP85L	Q5SZL2	805 aa		4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	LCE1F	Q5T754	118 aa		4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	FRG2	Q64ET8	278 aa		4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	DPPA4	Q7L190	304 aa		4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	SRBD1	Q8N5C6	995 aa	Known RBP	4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	METTL27	Q8N6F8	245 aa	Predicted RBP	4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	PSPC1	Q8WXF1	523 aa	Known RBP	4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	IGSF8	Q969P0	613 aa		4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	FBXO17	Q96EF6	278 aa		4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	ACOX2	Q99424	681 aa		4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	PAIP1	Q9H074	479 aa	Known RBP	4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	ZNF696	Q9H7X3	374 aa		4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	WASH6P	Q9NQA3	447 aa		4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	HCFC1R1	Q9NWW0	138 aa		4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	ABI3	Q9P2A4	366 aa		4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	GJD2	Q9UKL4	321 aa		4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	ARHGAP26	Q9UNA1	814 aa		4.22	□□□□□ -1.73
BRCA1-229	ENST00000621897	PTPRC	P08575	1304 aa		4.21	□□□□□ -1.73
BRCA1-229	ENST00000621897	KDM3A	Q9Y4C1	1321 aa		4.21	□□□□□ -1.73
BRCA1-229	ENST00000621897	CCDC196	A0A1B0GTZ2	297 aa		4.21	□□□□□ -1.74
BRCA1-229	ENST00000621897	TTC36	A6NLP5	189 aa		4.21	□□□□□ -1.74
BRCA1-229	ENST00000621897	BDNF	P23560	247 aa		4.21	□□□□□ -1.74
BRCA1-229	ENST00000621897	EPHA8	P29322	1005 aa	Predicted RBP	4.21	□□□□□ -1.74
BRCA1-229	ENST00000621897	HARS2	P49590	506 aa	Known RBP	4.21	□□□□□ -1.74
BRCA1-229	ENST00000621897	RUNX1T1	Q06455	604 aa		4.21	□□□□□ -1.74
BRCA1-229	ENST00000621897	SIRPB2	Q5JXA9	342 aa		4.21	□□□□□ -1.74
BRCA1-229	ENST00000621897	SIGIRR	Q6IA17	410 aa		4.21	□□□□□ -1.74
BRCA1-229	ENST00000621897	FBXL22	Q6P050	247 aa		4.21	□□□□□ -1.74
BRCA1-229	ENST00000621897	FAM43B	Q6ZT52	329 aa	Predicted RBP	4.21	□□□□□ -1.74
BRCA1-229	ENST00000621897	PCGF5	Q86SE9	256 aa		4.21	□□□□□ -1.74
BRCA1-229	ENST00000621897	SLC38A5	Q8WUX1	472 aa		4.21	□□□□□ -1.74
BRCA1-229	ENST00000621897	APBB2	Q92870	758 aa		4.21	□□□□□ -1.74
BRCA1-229	ENST00000621897	QRFPR	Q96P65	431 aa		4.21	□□□□□ -1.74
BRCA1-229	ENST00000621897	PCGF1	Q9BSM1	259 aa		4.21	□□□□□ -1.74
BRCA1-229	ENST00000621897	LRRC1	Q9BTT6	524 aa		4.21	□□□□□ -1.74
BRCA1-229	ENST00000621897	SLC28A3	Q9HAS3	691 aa		4.21	□□□□□ -1.74

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