RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 IVLP07476 585 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 TBC1D3HP0C7X1 549 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 C6P13671 934 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 GM2AP17900 193 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 AOC1P19801 751 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 GCAP28676 217 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 OXTRP30559 389 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 FOXN2P32314 431 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 ETV3P41162 512 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 ADPRHP54922 357 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 DCDC1P59894 354 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 RPS21P63220 83 aaKnown RBP7.99□□□□□ -1.13
CPNE3-209ENST00000620393 CACNG1Q06432 222 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 ZNF844Q08AG5 666 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 CTBP1Q13363 440 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 AGERQ15109 404 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 CHRNA6Q15825 494 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 GPR33Q49SQ1 333 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 FASTKD1Q53R41 847 aaKnown RBP7.99□□□□□ -1.13
CPNE3-209ENST00000620393 CEP85LQ5SZL2 805 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 GRTP1Q5TC63 336 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 CWF19L1Q69YN2 538 aaKnown RBP7.99□□□□□ -1.13
CPNE3-209ENST00000620393 TBC1D3GQ6DHY5 549 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 TBC1D3CQ6IPX1 549 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 ANO7Q6IWH7 933 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 MRNIPQ6NTE8 343 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 AFTPHQ6ULP2 937 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 KIAA0408Q6ZU52 694 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 MARK2Q7KZI7 788 aaKnown RBP7.99□□□□□ -1.13
CPNE3-209ENST00000620393 ZNF765Q7L2R6 523 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 SNX20Q7Z614 316 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 GALNT7Q86SF2 657 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 SLC26A11Q86WA9 606 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 RASSF3Q86WH2 238 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 TBC1D3Q8IZP1 549 aaPredicted RBP7.99□□□□□ -1.13
CPNE3-209ENST00000620393 C2CD4AQ8NCU7 369 aaPredicted RBP7.99□□□□□ -1.13
CPNE3-209ENST00000620393 ASB12Q8WXK4 309 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 MRRFQ96E11 262 aaKnown RBP7.99□□□□□ -1.13
CPNE3-209ENST00000620393 DTD2Q96FN9 168 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 PKNOX2Q96KN3 472 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 PLEKHG4BQ96PX9 1271 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 HHIPQ96QV1 700 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 TCF12Q99081 682 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 CPNE1Q99829 537 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 FAM167BQ9BTA0 163 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 DHRS4Q9BTZ2 278 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 C1QTNF2Q9BXJ5 285 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 BTBD1Q9H0C5 482 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 ACBD3Q9H3P7 528 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 ASB8Q9H765 288 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 SGK2Q9HBY8 427 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 PREBQ9HCU5 417 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 CATSPERZQ9NTU4 200 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 NSMCE4AQ9NXX6 385 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 ZFATQ9P243 1243 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 USP36Q9P275 1121 aaKnown RBP7.99□□□□□ -1.13
CPNE3-209ENST00000620393 BCCIPQ9P287 314 aaKnown RBP eCLIP7.99□□□□□ -1.13
CPNE3-209ENST00000620393 MARCH4Q9P2E8 410 aaPredicted RBP7.99□□□□□ -1.13
CPNE3-209ENST00000620393 NFKBIL1Q9UBC1 381 aaPredicted RBP7.99□□□□□ -1.13
CPNE3-209ENST00000620393 FBXO5Q9UKT4 447 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 SLC30A1Q9Y6M5 507 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 KIAA1549LQ6ZVL6 1849 aa7.99□□□□□ -1.13
CPNE3-209ENST00000620393 TRBV5-4A0A0C4DH59 114 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 A0A1W2PQU0 124 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 LRRC72A6NJI9 287 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 AGAP14A8MT82 685 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 C10orf142B7Z368 130 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 OPA1O60313 960 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 UGT1A9O60656 530 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 RNGTTO60942 597 aaKnown RBP7.98□□□□□ -1.13
CPNE3-209ENST00000620393 CDH16O75309 829 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 S1PR4O95977 384 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 INHBAP08476 426 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 UGT1A6P19224 532 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 ITGALP20701 1170 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 OGNP20774 298 aaKnown RBP7.98□□□□□ -1.13
CPNE3-209ENST00000620393 UGT1A1P22309 533 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 UGT1A4P22310 534 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 GABRB3P28472 473 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 PMLP29590 882 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 HOXA6P31267 233 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 ACSL1P33121 698 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 UGT1A3P35503 534 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 UGT1A5P35504 534 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 GP5P40197 560 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 SLCO1A2P46721 670 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 LEPRP48357 1165 aaKnown RBP7.98□□□□□ -1.13
CPNE3-209ENST00000620393 CDKN1CP49918 316 aaPredicted RBP7.98□□□□□ -1.13
CPNE3-209ENST00000620393 SERPINB9P50453 376 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 CCR3P51677 355 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 DPTQ07507 201 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 ILF2Q12905 390 aaKnown RBP7.98□□□□□ -1.13
CPNE3-209ENST00000620393 SGCGQ13326 291 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 NFATC2Q13469 925 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 EFTUD2Q15029 972 aaKnown RBP eCLIP7.98□□□□□ -1.136e-7■■■□□ 16.6
CPNE3-209ENST00000620393 ZNF284Q2VY69 593 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 MAP7D1Q3KQU3 841 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 KRT71Q3SY84 523 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 ZRANB3Q5FWF4 1079 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 LGSNQ5TDP6 509 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms