RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 PLPP4Q5VZY2 271 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 RPS27LQ71UM5 84 aaKnown RBP13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 PQLC1Q8N2U9 271 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 FAM156AQ8NDB6 213 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 ELMO1Q92556 727 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 PRR11Q96HE9 360 aaPredicted RBP13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 TCF12Q99081 682 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 TSEN34Q9BSV6 310 aaKnown RBP13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 DHRS4Q9BTZ2 278 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 CREBZFQ9NS37 354 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 POMPQ9Y244 141 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 CARNS1A5YM72 827 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 A8MT66 165 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 PEX1O43933 1283 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 PFDN1O60925 122 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 OTCP00480 354 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 OGNP20774 298 aaKnown RBP13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 RPL38P63173 70 aaKnown RBP13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 SERINC3Q13530 473 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 ZNF697Q5TEC3 545 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 CGB2Q6NT52 195 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 SCD5Q86SK9 330 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 UMODL1-AS1Q8N2C9 162 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 CORO1CQ9ULV4 474 aaPredicted RBP13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 MRPS23Q9Y3D9 190 aaKnown RBP13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 GLYATL1P3A0A0U1RQE8 302 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 CCL16O15467 120 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 ZNF682O95780 498 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 IDO1P14902 403 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 MAGEA6P43360 314 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 TAF1AQ15573 450 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 SPDYE7PQ495Y7 208 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 PLEKHG4Q58EX7 1191 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 CAMK1DQ8IU85 385 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 PGAM4Q8N0Y7 254 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 SIDT2Q8NBJ9 832 aaKnown RBP13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 ARNTL2Q8WYA1 636 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 ZNF599Q96NL3 588 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 IL12RB2Q99665 862 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 LIMD1Q9UGP4 676 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 LEF1Q9UJU2 399 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 ILVBLA1L0T0 632 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 ALDH1A2O94788 518 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 OAZ2O95190 189 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 LDLRP01130 860 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 FCGR1AP12314 374 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 IGFBP6P24592 240 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 SOAT1P35610 550 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 IRF8Q02556 426 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 CREMQ03060 361 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 LCP2Q13094 533 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 VPS26BQ4G0F5 336 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 GRAMD4Q6IC98 578 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 CERS6Q6ZMG9 384 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 METTL3Q86U44 580 aaKnown RBP13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 TRPV1Q8NER1 839 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 TBC1D30Q9Y2I9 924 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 C15orf38-AP3S2A0A0A6YYH1 394 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 SMNDC1O75940 238 aaKnown RBP eCLIP13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 GJB5O95377 273 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 OAS1P00973 400 aaKnown RBP13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 ACRP10323 421 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 HOXD8P13378 290 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 FRMD7Q6ZUT3 714 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 ARPINQ7Z6K5 226 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 SLC7A6OSQ96CW6 309 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 POLR3BQ9NW08 1133 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 MKS1Q9NXB0 559 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 DPP7Q9UHL4 492 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 PSMD13Q9UNM6 376 aa13.14□□□□□ -0.31
PPP4R3B-206ENST00000616407 ZCWPW2A0A1B0GU75 182 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 NIPSNAP2O75323 286 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 PRDX6P30041 224 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 S100A3P33764 101 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 ACTR3P61158 418 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 CACNG1Q06432 222 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 SETMARQ53H47 684 aaPredicted RBP13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 RTP2Q5QGT7 225 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 FBXL19Q6PCT2 694 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 ZNF461Q8TAF7 563 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 COMMD8Q9NX08 183 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 SH3BP4Q9P0V3 963 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 PRAMEF11O60813 436 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 GJA1P17302 382 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 AOC1P19801 751 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 CSKP41240 450 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 DYNC1I2Q13409 638 aaKnown RBP13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 CAMK2GQ13555 558 aaPredicted RBP13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 FAM98BQ52LJ0 330 aaKnown RBP13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 CLLU1OSQ5K130 101 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 PAOXQ6QHF9 649 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 HORMAD1Q86X24 394 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 CILP2Q8IUL8 1156 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 IMP4Q96G21 291 aaKnown RBP13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 TMEM175Q9BSA9 504 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 C6orf203Q9P0P8 240 aaPredicted RBP13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 TMCO1Q9UM00 188 aa13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 FAM32AQ9Y421 112 aaKnown RBP13.13□□□□□ -0.31
PPP4R3B-206ENST00000616407 PCDHB1Q9Y5F3 818 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms