RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 MAST2Q6P0Q8 1798 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 OR2AG2A6NM03 316 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 COCHO43405 550 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 DCXO43602 365 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 KDELR3O43731 214 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 HS6ST1O60243 411 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 HLA-DQB2P05538 268 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 MYBL2P10244 700 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 MAT2AP31153 395 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 SQLEQ14534 574 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 CPSF6Q16630 551 aaKnown RBP eCLIP9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 RTP2Q5QGT7 225 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 C15orf39Q6ZRI6 1047 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 CHSY3Q70JA7 882 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 R3HCC1LQ7Z5L2 792 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 SPATA6LQ8N4H0 392 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 C1orf74Q96LT6 269 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 CDCA3Q99618 268 aaPredicted RBP9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 POLR3BQ9NW08 1133 aaPredicted RBP9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 NUDT4Q9NZJ9 180 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 SNTNA6NMZ2 147 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 HDAC3O15379 428 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 ADAMTS4O75173 837 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 PEX11AO75192 247 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 NQO1P15559 274 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 SLC25A11Q02978 314 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 BST1Q10588 318 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 UBXN11Q5T124 520 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 TMEM220Q6QAJ8 160 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 SNX32Q86XE0 403 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 MMAAQ8IVH4 418 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 CFAP206Q8IYR0 622 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 CDK20Q8IZL9 346 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 GALNT4Q8N4A0 578 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 DDX1Q92499 740 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 STRA6Q9BX79 667 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 PRRG3Q9BZD7 231 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 ADPRHL2Q9NX46 363 aa9.41□□□□□ -0.9
CLTCL1-208ENST00000615606 MYH7P12883 1935 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 NMBRP28336 390 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 SERPINB3P29508 390 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 GUCA1AP43080 201 aaPredicted RBP9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 PTGIRP43119 386 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 CCT8P50990 548 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 SLC10A7Q0GE19 358 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 SF1Q15637 639 aaKnown RBP9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 ZNF783Q6ZMS7 281 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 SNX20Q7Z614 316 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 CAMK1DQ8IU85 385 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 ACTRT2Q8TDY3 377 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 CYB5D2Q8WUJ1 264 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 CYP2S1Q96SQ9 504 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 SGIP1Q9BQI5 828 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 HEBP2Q9Y5Z4 205 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 OR10H2O60403 315 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 SNAP91O60641 907 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 PIAS1O75925 651 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 ZNF23P17027 643 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 GTF2E2P29084 291 aaKnown RBP9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 CRHR1P34998 444 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 ACVRL1P37023 503 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 CYTH1Q15438 398 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 MYLK3Q32MK0 819 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 FAM98BQ52LJ0 330 aaKnown RBP9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 TTMPQ5BVD1 217 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 CLLU1OSQ5K130 101 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 C16orf87Q6PH81 154 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 DNAJC14Q6Y2X3 702 aaPredicted RBP9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 CYP4X1Q8N118 509 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 DACH2Q96NX9 599 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 ACAT2Q9BWD1 397 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 EBF3Q9H4W6 596 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 KRT87PA6NCN2 255 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 RHPN2P1A8MT19 583 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 ZNF487B1APH4 448 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 H0Y858 1186 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 M0QZQ0 153 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 STK16O75716 305 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 IPO13O94829 963 aaKnown RBP9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 UBOX5O94941 541 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 KCNH1O95259 989 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 HOXB2P14652 356 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 HNF4AP41235 474 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 WDR5P61964 334 aaKnown RBP9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 RPL38P63173 70 aaKnown RBP9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 MPP1Q00013 466 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 VAC14Q08AM6 782 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 GALNT2Q10471 571 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 SAMD4BQ5PRF9 694 aaKnown RBP9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 EXOC3L1Q86VI1 746 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 KRT73Q86Y46 540 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 HID1Q8IV36 788 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 PAAF1Q9BRP4 392 aa9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 NSUN3Q9H649 340 aaKnown RBP9.4□□□□□ -0.9
CLTCL1-208ENST00000615606 LRP5O75197 1615 aa9.4□□□□□ -0.91
CLTCL1-208ENST00000615606 ABCA3Q99758 1704 aa9.4□□□□□ -0.91
CLTCL1-208ENST00000615606 CENPAP49450 140 aa9.4□□□□□ -0.91
CLTCL1-208ENST00000615606 GDF10P55107 478 aa9.4□□□□□ -0.91
CLTCL1-208ENST00000615606 OGDHQ02218 1023 aa9.4□□□□□ -0.91
CLTCL1-208ENST00000615606 GRM2Q14416 872 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms