RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 VANGL2Q9ULK5 521 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 CSADQ9Y600 493 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 MAU2Q9Y6X3 613 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 A0A0A0MRY4 1105 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 LOC100506127A0A0U1RQW1 187 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 ISPDA4D126 451 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 TRIM64A6NGJ6 449 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 SAGE2PA6NJ88 616 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 NPM3O75607 178 aaKnown RBP10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 PGLSO95336 258 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 MED26O95402 600 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 PSAPP07602 524 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 PTPRAP18433 802 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 ITGB6P18564 788 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 EIF2DP41214 584 aaKnown RBP10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 BCAT1P54687 386 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 MAP3K7CLP57077 242 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 DAG1Q14118 895 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 TBRG1Q3YBR2 411 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 SLFN12LQ6IEE8 588 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 SPESP1Q6UW49 350 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 RETREG3Q86VR2 466 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 GALNT6Q8NCL4 622 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 PIK3C3Q8NEB9 887 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 RDH11Q8TC12 318 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 ARNTL2Q8WYA1 636 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 TMBIM1Q969X1 311 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 FKBP10Q96AY3 582 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 SPATA13Q96N96 652 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 PPP1R16BQ96T49 567 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 DHRS9Q9BPW9 319 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 IL22Q9GZX6 179 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 AS3MTQ9HBK9 375 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 PAK1IP1Q9NWT1 392 aaPredicted RBP10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 UBP1Q9NZI7 540 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 KIAA1257Q9ULG3 409 aa10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 EIF3LQ9Y262 564 aaKnown RBP10.35□□□□□ -0.75
TNFAIP3-208ENST00000615468 H0YAE9 185 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 TSC22D2O75157 780 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 TNFSF9P41273 254 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 GP2P55259 537 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 ADARB1P78563 741 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 KRR1Q13601 381 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 TRIP4Q15650 581 aaPredicted RBP10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 SYT16Q17RD7 645 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 DUOXA2Q1HG44 320 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 STEAP4Q687X5 459 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 TUBA3EQ6PEY2 450 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 TTC16Q8NEE8 873 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 MCPH1Q8NEM0 835 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 DACT3Q96B18 629 aaPredicted RBP10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 LGALS12Q96DT0 336 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 MCRS1Q96EZ8 462 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 PIWIL1Q96J94 861 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 NSMCE2Q96MF7 247 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 SNX18Q96RF0 628 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 ALG2Q9H553 416 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 EML4Q9HC35 981 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 C14orf119Q9NWQ9 140 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 AASSQ9UDR5 926 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 MFHAS1Q9Y4C4 1052 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 ORC6Q9Y5N6 252 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 C7P10643 843 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 BDNFP23560 247 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 FMO3P31513 532 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 ARL4AP40617 200 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 LIPEQ05469 1076 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 CD47Q08722 323 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 EPS8Q12929 822 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 TYSND1Q2T9J0 566 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 ZNF667Q5HYK9 610 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 SLX4IPQ5VYV7 408 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 FAM45BPQ6NSW5 357 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 CUZD1Q86UP6 607 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 SPNS2Q8IVW8 549 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 ABI1Q8IZP0 508 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 METTL4Q8N3J2 472 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 TCAIMQ8N3R3 496 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 LSMEM1Q8N8F7 131 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 FAM45AQ8TCE6 357 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 UBASH3BQ8TF42 649 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 CCDC120Q96HB5 630 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 ELMO2Q96JJ3 720 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 DCSTAMPQ9H295 470 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 AGO4Q9HCK5 861 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 C8orf4Q9NR00 106 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 CCDC154A6NI56 674 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 CRCPO75575 148 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 CCNE2O96020 404 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 YBX3P16989 372 aaKnown RBP eCLIP10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 PTGER2P43116 358 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 GSK3BP49841 420 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 ZNF132P52740 706 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 CHRNB3Q05901 458 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 CDC20Q12834 499 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 FXNQ16595 210 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 CDONQ4KMG0 1287 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 CERCAMQ5T4B2 595 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 ERAP2Q6P179 960 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 PIWIL4Q7Z3Z4 852 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms