RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 CYS1Q717R9 158 aa13.07□□□□□ -0.32
FOXN3-219ENST00000615335 GRASPQ7Z6J2 395 aaPredicted RBP13.07□□□□□ -0.32
FOXN3-219ENST00000615335 CHERPQ8IWX8 916 aaKnown RBP13.07□□□□□ -0.32
FOXN3-219ENST00000615335 SIX5Q8N196 739 aa13.07□□□□□ -0.32
FOXN3-219ENST00000615335 PYROXD2Q8N2H3 581 aa13.07□□□□□ -0.32
FOXN3-219ENST00000615335 NTAN1Q96AB6 310 aa13.07□□□□□ -0.32
FOXN3-219ENST00000615335 RMND5BQ96G75 393 aaPredicted RBP13.07□□□□□ -0.32
FOXN3-219ENST00000615335 CSPG4P5Q96PW8 444 aa13.07□□□□□ -0.32
FOXN3-219ENST00000615335 KCTD15Q96SI1 283 aaPredicted RBP13.07□□□□□ -0.32
FOXN3-219ENST00000615335 SIAEQ9HAT2 523 aa13.07□□□□□ -0.32
FOXN3-219ENST00000615335 ANLNQ9NQW6 1124 aa13.07□□□□□ -0.32
FOXN3-219ENST00000615335 OBSL1O75147 1896 aa13.06□□□□□ -0.32
FOXN3-219ENST00000615335 C5orf42Q9H799 3197 aa13.06□□□□□ -0.32
FOXN3-219ENST00000615335 TOP3BO95985 862 aaKnown RBP13.06□□□□□ -0.32
FOXN3-219ENST00000615335 HDCP19113 662 aa13.06□□□□□ -0.32
FOXN3-219ENST00000615335 CCR2P41597 374 aa13.06□□□□□ -0.32
FOXN3-219ENST00000615335 AIF1P55008 147 aa13.06□□□□□ -0.32
FOXN3-219ENST00000615335 CD300CQ08708 224 aa13.06□□□□□ -0.32
FOXN3-219ENST00000615335 HYAL1Q12794 435 aa13.06□□□□□ -0.32
FOXN3-219ENST00000615335 KCNC3Q14003 757 aa13.06□□□□□ -0.32
FOXN3-219ENST00000615335 PPP2R5DQ14738 602 aa13.06□□□□□ -0.32
FOXN3-219ENST00000615335 TRIP4Q15650 581 aaPredicted RBP13.06□□□□□ -0.32
FOXN3-219ENST00000615335 LSM12Q3MHD2 195 aaKnown RBP13.06□□□□□ -0.32
FOXN3-219ENST00000615335 FASTKD1Q53R41 847 aaKnown RBP13.06□□□□□ -0.32
FOXN3-219ENST00000615335 BRMS1LQ5PSV4 323 aa13.06□□□□□ -0.32
FOXN3-219ENST00000615335 STXBP5Q5T5C0 1151 aa13.06□□□□□ -0.32
FOXN3-219ENST00000615335 STEAP4Q687X5 459 aa13.06□□□□□ -0.32
FOXN3-219ENST00000615335 CASC4Q6P4E1 433 aa13.06□□□□□ -0.32
FOXN3-219ENST00000615335 FAM20CQ8IXL6 584 aa13.06□□□□□ -0.32
FOXN3-219ENST00000615335 ARL14EPQ8N8R7 260 aaPredicted RBP13.06□□□□□ -0.32
FOXN3-219ENST00000615335 C1orf50Q9BV19 199 aa13.06□□□□□ -0.32
FOXN3-219ENST00000615335 CDH19Q9H159 772 aa13.06□□□□□ -0.32
FOXN3-219ENST00000615335 MTMR10Q9NXD2 777 aa13.06□□□□□ -0.32
FOXN3-219ENST00000615335 ANKMY1Q9P2S6 941 aa13.06□□□□□ -0.32
FOXN3-219ENST00000615335 DENND4CQ5VZ89 1909 aa13.06□□□□□ -0.32
FOXN3-219ENST00000615335 A0A087WXM4 84 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 MEI4A8MW99 385 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 I6L893 689 aaPredicted RBP13.05□□□□□ -0.32
FOXN3-219ENST00000615335 GIPC1O14908 333 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 FGF19O95750 216 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 SLC2A3P11169 496 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 MBL2P11226 248 aaPredicted RBP13.05□□□□□ -0.32
FOXN3-219ENST00000615335 BMXP51813 675 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 NTHL1P78549 312 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 HEATR4Q86WZ0 1026 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 PSTKQ8IV42 348 aaKnown RBP13.05□□□□□ -0.32
FOXN3-219ENST00000615335 ACMSDQ8TDX5 336 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 TFB1MQ8WVM0 346 aaKnown RBP13.05□□□□□ -0.32
FOXN3-219ENST00000615335 SMG7Q92540 1137 aaKnown RBP13.05□□□□□ -0.32
FOXN3-219ENST00000615335 ZNF707Q96C28 371 aaPredicted RBP13.05□□□□□ -0.32
FOXN3-219ENST00000615335 TCEAL4Q96EI5 215 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 SIK2Q9H0K1 926 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 STN1Q9H668 368 aaKnown RBP13.05□□□□□ -0.32
FOXN3-219ENST00000615335 SFXN1Q9H9B4 322 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 DTLQ9NZJ0 730 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 DAPK2Q9UIK4 370 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 PTBP2Q9UKA9 531 aaKnown RBP13.05□□□□□ -0.32
FOXN3-219ENST00000615335 EYSQ5T1H1 3165 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 A0A0A0MRY4 1105 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 SDR42E2A6NKP2 422 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 HACD1B0YJ81 288 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 F5H423 210 aaPredicted RBP13.05□□□□□ -0.32
FOXN3-219ENST00000615335 NRG2O14511 850 aaPredicted RBP13.05□□□□□ -0.32
FOXN3-219ENST00000615335 SLC22A1O15245 554 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 LINC01565O15544 149 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 SNAP91O60641 907 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 GLRA3O75311 464 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 ALDH1A2O94788 518 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 CKMP06732 381 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 MLNP12872 115 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 PRKACBP22694 351 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 NDST2P52849 883 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 EPHA5P54756 1037 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 EIF2B5Q13144 721 aaKnown RBP13.05□□□□□ -0.32
FOXN3-219ENST00000615335 NCBP2-AS2Q69YL0 99 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 C16orf46Q6P387 395 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 ZNF354CQ86Y25 554 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 UNC5BQ8IZJ1 945 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 LEMD2Q8NC56 503 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 PDPRQ8NCN5 879 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 TTC16Q8NEE8 873 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 ADAMTS16Q8TE57 1224 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 HTR3CQ8WXA8 447 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 CDKL2Q92772 493 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 CCDC124Q96CT7 223 aaKnown RBP13.05□□□□□ -0.32
FOXN3-219ENST00000615335 SLC39A13Q96H72 371 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 FCRL2Q96LA5 508 aaPredicted RBP13.05□□□□□ -0.32
FOXN3-219ENST00000615335 SPATA13Q96N96 652 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 SLC22A12Q96S37 553 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 EBF4Q9BQW3 602 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 APOL5Q9BWW9 433 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 GKN1Q9NS71 199 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 DZANK1Q9NVP4 752 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 SMPD4Q9NXE4 827 aa13.05□□□□□ -0.32
FOXN3-219ENST00000615335 TMEM265A0A087WTH1 108 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 TRIM64BA6NI03 449 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 AREL1O15033 823 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 PAGE1O75459 146 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 KRT6AP02538 564 aa13.04□□□□□ -0.32
FOXN3-219ENST00000615335 KRT6BP04259 564 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms