RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 IHHQ14623 411 aa10.84□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 GPNMBQ14956 572 aa10.84□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 FAM45BPQ6NSW5 357 aa10.84□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 C16orf89Q6UX73 402 aa10.84□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ZNF783Q6ZMS7 281 aa10.84□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TMEM26Q6ZUK4 368 aa10.84□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 NCCRP1Q6ZVX7 275 aaPredicted RBP10.84□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 KBTBD6Q86V97 674 aa10.84□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 DENND6AQ8IWF6 608 aa10.84□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PGBD5Q8N414 524 aa10.84□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 FAM45AQ8TCE6 357 aa10.84□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 MRPL9Q9BYD2 267 aaKnown RBP10.84□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 EML4Q9HC35 981 aaKnown RBP10.84□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ZBTB26Q9HCK0 441 aa10.84□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 BACE2Q9Y5Z0 518 aa10.84□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PDE4DIPQ5VU43 2346 aa10.84□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 C7orf72A4D263 438 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TAS2R39P59534 338 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CTXN3Q4LDR2 81 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CHST9Q7L1S5 443 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 HASPINQ8TF76 798 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 KCTD4Q8WVF5 259 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 NCSTNQ92542 709 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 IGSF8Q969P0 613 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 NXNL1Q96CM4 212 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 MRPS26Q9BYN8 205 aaKnown RBP10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 INTS10Q9NVR2 710 aaKnown RBP10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ABI2Q9NYB9 513 aaPredicted RBP10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 MPP6Q9NZW5 540 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SLC2A6Q9UGQ3 507 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ZDHHC2Q9UIJ5 367 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 NOD1Q9Y239 953 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 A0A1W2PQ45 241 aaPredicted RBP10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 A0A1W2PQY0 241 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 A6NL46 340 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 K7EPI3 171 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 LATS1O95835 1130 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 FGF4P08620 206 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CCDC166P0CW27 439 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 MAGEA8P43361 318 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 C21orf59P57076 290 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SLC10A7Q0GE19 358 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 LSM12Q3MHD2 195 aaKnown RBP10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ALFQ53S48 1182 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SIRPB2Q5JXA9 342 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 OTUD3Q5T2D3 398 aaPredicted RBP10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 EGFLAMQ63HQ2 1017 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SLC8B1Q6J4K2 584 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 HACD2Q6Y1H2 254 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ANKS3Q6ZW76 656 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 BRSK1Q8TDC3 778 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 USP33Q8TEY7 942 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 HEXDCQ8WVB3 486 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TOP1MTQ969P6 601 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 POLR1EQ9GZS1 481 aaKnown RBP10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 INIPQ9NRY2 104 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TBC1D23Q9NUY8 699 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 XPR1Q9UBH6 696 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 STK39Q9UEW8 545 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 MAFFQ9ULX9 164 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CDYLQ9Y232 598 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ZNF106Q9H2Y7 1883 aaKnown RBP10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 NEMP2A6NFY4 417 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 J3KR12 359 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 COQ9O75208 318 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 IMPDH1P20839 514 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 MAP4P27816 1152 aaKnown RBP10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PRMT2P55345 433 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CTBP1Q13363 440 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ADGRE1Q14246 886 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 FBXO48Q5FWF7 155 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 FGD3Q5JSP0 725 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 NADSYN1Q6IA69 706 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 LRRC8DQ7L1W4 858 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PLD4Q96BZ4 506 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 DUS3LQ96G46 650 aaKnown RBP10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 MYRFLQ96LU7 910 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 FAM193BQ96PV7 902 aaPredicted RBP10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 C1QTNF3Q9BXJ4 246 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 POLR1BQ9H9Y6 1135 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TMEM45AQ9NWC5 275 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 NDUFA13Q9P0J0 144 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 MARCH2Q9P0N8 246 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 VWA7Q9Y334 891 aa10.83□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 H3BNC9 293 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 B4GAT1O43505 415 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 RAMP2O60895 175 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 GPC4O75487 556 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 IPO13O94829 963 aaKnown RBP10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 OR4Q2P0C623 313 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ZNF182P17025 639 aaPredicted RBP10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ME2P23368 584 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ALDH4A1P30038 563 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ARL1P40616 181 aaPredicted RBP10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 GRIA3P42263 894 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CDH4P55283 916 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 POLD3Q15054 466 aaPredicted RBP10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 DDR2Q16832 855 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ZNF470Q6ECI4 717 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 RYBPQ8N488 228 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms