RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 CLSTN3Q9BQT9 956 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 C1QTNF1Q9BXJ1 281 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 ACE2Q9BYF1 805 aaPredicted RBP16.46■□□□□ 0.23
CNOT3-208ENST00000613073 OLAHQ9NV23 265 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 DNAJC28Q9NX36 388 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 MTRRQ9UBK8 725 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 FBXO5Q9UKT4 447 aa16.46■□□□□ 0.23
CNOT3-208ENST00000613073 HEATR9A2RTY3 570 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 COCHO43405 550 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 OXSR1O95747 527 aaPredicted RBP16.45■□□□□ 0.22
CNOT3-208ENST00000613073 PIRTP0C851 137 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 CDH3P22223 829 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 PIK3R1P27986 724 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 CCR10P46092 362 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 PRMT2P55345 433 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 IL10RBQ08334 325 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 CYP2A13Q16696 494 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 UGP2Q16851 508 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 FSCBQ5H9T9 825 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 IL31Q6EBC2 164 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 GPR180Q86V85 440 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 ZNF786Q8N393 782 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 TEX26Q8N6G2 289 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 TMEM102Q8N9M5 508 aaPredicted RBP16.45■□□□□ 0.22
CNOT3-208ENST00000613073 OR6P1Q8NGX9 317 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 C2orf15Q8WU43 125 aaKnown RBP16.45■□□□□ 0.22
CNOT3-208ENST00000613073 PTCD2Q8WV60 388 aaKnown RBP16.45■□□□□ 0.22
CNOT3-208ENST00000613073 IGSF21Q96ID5 467 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 TSNARE1Q96NA8 513 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 CWH43Q9H720 699 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 FADS3Q9Y5Q0 445 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 ZNF840PA6NDX5 716 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 OR51F1A6NGY5 319 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 ACSL4O60488 711 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 HSPA4LO95757 839 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 CCL5P13501 91 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 STMN1P16949 149 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 GLDCP23378 1020 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 PPARGP37231 505 aaPredicted RBP16.45■□□□□ 0.22
CNOT3-208ENST00000613073 HSPA13P48723 471 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 HARS2P49590 506 aaKnown RBP16.45■□□□□ 0.22
CNOT3-208ENST00000613073 TAS2R39P59534 338 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 ZNF235Q14590 738 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 PTPRCAPQ14761 206 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 EML3Q32P44 896 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 FGD3Q5JSP0 725 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 RBM20Q5T481 1227 aaKnown RBP16.45■□□□□ 0.22
CNOT3-208ENST00000613073 GPR107Q5VW38 600 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 EGFLAMQ63HQ2 1017 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 TMEM198Q66K66 360 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 KIAA0930Q6ICG6 404 aaPredicted RBP16.45■□□□□ 0.22
CNOT3-208ENST00000613073 RNF135Q8IUD6 432 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 CENPLQ8N0S6 344 aaPredicted RBP16.45■□□□□ 0.22
CNOT3-208ENST00000613073 NXNL1Q96CM4 212 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 NAA50Q9GZZ1 169 aaKnown RBP16.45■□□□□ 0.22
CNOT3-208ENST00000613073 VPS45Q9NRW7 570 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 PADI4Q9UM07 663 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 SNX13Q9Y5W8 968 aa16.45■□□□□ 0.22
CNOT3-208ENST00000613073 PRSS51A0A1B0GVH4 220 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 TSPAN3O60637 253 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 CXCL10P02778 98 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 TUFMP49411 452 aaKnown RBP16.44■□□□□ 0.22
CNOT3-208ENST00000613073 RAB10P61026 200 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 SLC12A1Q13621 1099 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 GALNT3Q14435 633 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 TSTD2Q5T7W7 516 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 ZFP1Q6P2D0 407 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 SLC39A5Q6ZMH5 540 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 CCDC117Q8IWD4 279 aaPredicted RBP16.44■□□□□ 0.22
CNOT3-208ENST00000613073 FSTL5Q8N475 847 aaPredicted RBP16.44■□□□□ 0.22
CNOT3-208ENST00000613073 FIBCD1Q8N539 461 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 C2CD4AQ8NCU7 369 aaPredicted RBP16.44■□□□□ 0.22
CNOT3-208ENST00000613073 OR13J1Q8NGT2 312 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 AUTS2Q8WXX7 1259 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 EXOC2Q96KP1 924 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 OMDQ99983 421 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 TTLL2Q9BWV7 592 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 PCDHAC1Q9H158 963 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 ARNT2Q9HBZ2 717 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 MRM3Q9HC36 420 aaKnown RBP16.44■□□□□ 0.22
CNOT3-208ENST00000613073 TRPC7Q9HCX4 862 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 ATP13A1Q9HD20 1204 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 ACOT9Q9Y305 439 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 FAM32AQ9Y421 112 aaKnown RBP16.44■□□□□ 0.22
CNOT3-208ENST00000613073 NDUFB5O43674 189 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 TRIM13O60858 407 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 KLKB1P03952 638 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 SBK3P0C264 359 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 CKMT2P17540 419 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 PRDX6P30041 224 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 SGSHP51688 502 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 ARSDP51689 593 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 ESRRGP62508 458 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 PLD1Q13393 1074 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 TAF12Q16514 161 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 PIGGQ5H8A4 983 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 MTX3Q5HYI7 312 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 TMEM151AQ8N4L1 468 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 BLOC1S5Q8TDH9 187 aa16.44■□□□□ 0.22
CNOT3-208ENST00000613073 BORCS5Q969J3 196 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms