RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 GABPB2Q8TAK5 448 aaPredicted RBP15.9■□□□□ 0.14
CLTCL1-207ENST00000611723 CDKL2Q92772 493 aa15.9■□□□□ 0.14
CLTCL1-207ENST00000611723 CCDC77Q9BR77 488 aa15.9■□□□□ 0.14
CLTCL1-207ENST00000611723 FAM167BQ9BTA0 163 aa15.9■□□□□ 0.14
CLTCL1-207ENST00000611723 TMEM109Q9BVC6 243 aa15.9■□□□□ 0.14
CLTCL1-207ENST00000611723 ABCG8Q9H221 673 aa15.9■□□□□ 0.14
CLTCL1-207ENST00000611723 SMYD2Q9NRG4 433 aa15.9■□□□□ 0.14
CLTCL1-207ENST00000611723 VPS18Q9P253 973 aa15.9■□□□□ 0.14
CLTCL1-207ENST00000611723 LRRK1Q38SD2 2015 aa15.9■□□□□ 0.14
CLTCL1-207ENST00000611723 A0A1W2PQU0 124 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 CXorf49A8MYA2 514 aaPredicted RBP15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 AXIN1O15169 862 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 CD3EAPO15446 510 aaKnown RBP15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 SRP72O76094 671 aaKnown RBP15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 SEMA4FO95754 770 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 MC4RP32245 332 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 ID4P47928 161 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 CCR5P51681 352 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 EIF3BP55884 814 aaKnown RBP15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 CACNG1Q06432 222 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 CHRNA6Q15825 494 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 ZNF284Q2VY69 593 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 KBTBD12Q3ZCT8 623 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 GPR33Q49SQ1 333 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 SEL1L3Q68CR1 1132 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 LRIG3Q6UXM1 1119 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 KIAA0408Q6ZU52 694 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 MARK2Q7KZI7 788 aaKnown RBP15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 SNX20Q7Z614 316 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 PTAR1Q7Z6K3 402 aaPredicted RBP15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 GALNT7Q86SF2 657 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 FAM124AQ86V42 546 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 C1orf210Q8IVY1 113 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 TRAM1L1Q8N609 369 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 DTWD2Q8NBA8 298 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 UHMK1Q8TAS1 419 aaKnown RBP15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 ZNF398Q8TD17 642 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 TOE1Q96GM8 510 aaKnown RBP15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 TCF12Q99081 682 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 DHRS4Q9BTZ2 278 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 SLC17A9Q9BYT1 436 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 ROPN1BQ9BZX4 212 aaPredicted RBP15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 PCED1AQ9H1Q7 454 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 VIPAS39Q9H9C1 493 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 PPCSQ9HAB8 311 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 ROPN1Q9HAT0 212 aaPredicted RBP15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 IARS2Q9NSE4 1012 aaKnown RBP15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 CATSPERZQ9NTU4 200 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 NSMCE4AQ9NXX6 385 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 CYP8B1Q9UNU6 501 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 PLAAQ9Y263 795 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 COQ6Q9Y2Z9 468 aa15.89■□□□□ 0.13
CLTCL1-207ENST00000611723 GVINP1Q7Z2Y8 2422 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 TRBV5-4A0A0C4DH59 114 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 OR51F1A6NGY5 319 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 MAP2K7O14733 419 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 LAMTOR5O43504 91 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 SHBGP04278 402 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 OGNP20774 298 aaKnown RBP15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 TEAD1P28347 426 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 NUBP1P53384 320 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 NFATC2Q13469 925 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 FGL2Q14314 439 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 RASA2Q15283 850 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 FASTKD1Q53R41 847 aaKnown RBP15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 MRNIPQ6NTE8 343 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 FAM151BQ6UXP7 276 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 CERS6Q6ZMG9 384 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 SLC26A11Q86WA9 606 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 LRRC6Q86X45 466 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 MAML2Q8IZL2 1156 aaPredicted RBP15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 C2CD4AQ8NCU7 369 aaPredicted RBP15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 SLC44A1Q8WWI5 657 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 SCAMP4Q969E2 229 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 AP2M1Q96CW1 435 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 NUS1Q96E22 293 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 LENG8Q96PV6 779 aaPredicted RBP15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 AGAP2Q99490 1192 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 ZSCAN5AQ9BUG6 496 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 TPSD1Q9BZJ3 242 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 PPANQ9NQ55 473 aaKnown RBP15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 SMOXQ9NWM0 555 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 IL1RAPL1Q9NZN1 696 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 ZFATQ9P243 1243 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 SLC30A1Q9Y6M5 507 aa15.88■□□□□ 0.13
CLTCL1-207ENST00000611723 ZNF106Q9H2Y7 1883 aaKnown RBP15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 GOLGA8KD6RF30 607 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 GOLGA8TH3BQL2 631 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 ATP8B1O43520 1251 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 LATO43561 262 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 PRAMEF1O95521 474 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 PAK4O96013 591 aaPredicted RBP15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 PYGLP06737 847 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 ITGALP20701 1170 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 NUDT1P36639 197 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 LEPRP48357 1165 aaKnown RBP15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 ILF2Q12905 390 aaKnown RBP15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 SGCGQ13326 291 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 ITGA9Q13797 1035 aa15.87■□□□□ 0.13
CLTCL1-207ENST00000611723 TYSND1Q2T9J0 566 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms