RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 SPATA22Q8NHS9 363 aa17.65■□□□□ 0.42
MUC1-224ENST00000611577 SLC35B2Q8TB61 432 aa17.65■□□□□ 0.42
MUC1-224ENST00000611577 LRRC45Q96CN5 670 aa17.65■□□□□ 0.42
MUC1-224ENST00000611577 PRR11Q96HE9 360 aaPredicted RBP17.65■□□□□ 0.42
MUC1-224ENST00000611577 NAP1L3Q99457 506 aaPredicted RBP17.65■□□□□ 0.42
MUC1-224ENST00000611577 TMEM121Q9BTD3 319 aa17.65■□□□□ 0.42
MUC1-224ENST00000611577 FSD1LQ9BXM9 530 aa17.65■□□□□ 0.42
MUC1-224ENST00000611577 UBP1Q9NZI7 540 aa17.65■□□□□ 0.42
MUC1-224ENST00000611577 B4GALT6Q9UBX8 382 aa17.65■□□□□ 0.42
MUC1-224ENST00000611577 FAM153AQ9UHL3 310 aa17.65■□□□□ 0.42
MUC1-224ENST00000611577 PCDHGA8Q9Y5G5 932 aa17.65■□□□□ 0.42
MUC1-224ENST00000611577 COL27A1Q8IZC6 1860 aaPredicted RBP17.65■□□□□ 0.42
MUC1-224ENST00000611577 LRRK1Q38SD2 2015 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 K7ENP7 123 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 SPINT1O43278 529 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 LIASO43766 372 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 TCEA3O75764 348 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 ANXA9O76027 345 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 MT-CYBP00156 380 aaPredicted RBP17.64■□□□□ 0.41
MUC1-224ENST00000611577 MMP2P08253 660 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 PDHA1P08559 390 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 CD68P34810 354 aaPredicted RBP17.64■□□□□ 0.41
MUC1-224ENST00000611577 LIG3P49916 1009 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 RPL26P61254 145 aaKnown RBP17.64■□□□□ 0.41
MUC1-224ENST00000611577 PERM1Q5SV97 790 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 INO80CQ6PI98 192 aaPredicted RBP17.64■□□□□ 0.41
MUC1-224ENST00000611577 DPPA4Q7L190 304 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 RBFAQ8N0V3 343 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 CCDC110Q8TBZ0 833 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 MED8Q96G25 268 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 SPATA13Q96N96 652 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 PPP1R2P1Q96PQ5 205 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 FCRL5Q96RD9 977 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 OSBPL9Q96SU4 736 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 KLF6Q99612 283 aaPredicted RBP17.64■□□□□ 0.41
MUC1-224ENST00000611577 NAPGQ99747 312 aaPredicted RBP17.64■□□□□ 0.41
MUC1-224ENST00000611577 GBA3Q9H227 469 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 CLMPQ9H6B4 373 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 SYNDIG1Q9H7V2 258 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 HOMER3Q9NSC5 361 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 SPASTQ9UBP0 616 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 SNX12Q9UMY4 172 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 RPL26L1Q9UNX3 145 aaKnown RBP17.64■□□□□ 0.41
MUC1-224ENST00000611577 ZKSCAN5Q9Y2L8 839 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 SSUH2Q9Y2M2 353 aa17.64■□□□□ 0.41
MUC1-224ENST00000611577 CTAGE9A4FU28 777 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 GOLGA6CA6NDK9 693 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 GOLGA6BA6NDN3 693 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 TPP1O14773 563 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 SLC28A2O43868 658 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 FZD6O60353 706 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 ALPIP09923 528 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 GOLGA6DP0CG33 693 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 TCP1P17987 556 aaKnown RBP17.63■□□□□ 0.41
MUC1-224ENST00000611577 RPIAP49247 311 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 GEMP55040 296 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 CDK18Q07002 472 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 EIF2B5Q13144 721 aaKnown RBP17.63■□□□□ 0.41
MUC1-224ENST00000611577 GALNT3Q14435 633 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 ACOX1Q15067 660 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 SLC14A2Q15849 920 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 CCDC81Q6ZN84 652 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 GSTA5Q7RTV2 222 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 C17orf53Q8N3J3 647 aaPredicted RBP17.63■□□□□ 0.41
MUC1-224ENST00000611577 ARL14Q8N4G2 192 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 CCDC89Q8N998 374 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 DENND6BQ8NEG7 585 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 IPMKQ8NFU5 416 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 WDR36Q8NI36 951 aaKnown RBP17.63■□□□□ 0.41
MUC1-224ENST00000611577 BTN2A2Q8WVV5 523 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 PIH1D2Q8WWB5 315 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 SPOCK2Q92563 424 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 GLMNQ92990 594 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 SCRN2Q96FV2 425 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 LENG8Q96PV6 779 aaPredicted RBP17.63■□□□□ 0.41
MUC1-224ENST00000611577 MLPHQ9BV36 600 aaPredicted RBP17.63■□□□□ 0.41
MUC1-224ENST00000611577 C1QTNF2Q9BXJ5 285 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 TCEAL2Q9H3H9 227 aaPredicted RBP17.63■□□□□ 0.41
MUC1-224ENST00000611577 GOLGA6AQ9NYA3 693 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 APOBEC3BQ9UH17 382 aaKnown RBP17.63■□□□□ 0.41
MUC1-224ENST00000611577 COQ6Q9Y2Z9 468 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 AAR2Q9Y312 384 aaKnown RBP17.63■□□□□ 0.41
MUC1-224ENST00000611577 NAV2Q8IVL1 2488 aa17.63■□□□□ 0.41
MUC1-224ENST00000611577 A0A0J9YYE9 177 aa17.62■□□□□ 0.41
MUC1-224ENST00000611577 C5orf60A6NFR6 353 aa17.62■□□□□ 0.41
MUC1-224ENST00000611577 CDRT15L2A8MXV6 281 aa17.62■□□□□ 0.41
MUC1-224ENST00000611577 PGRMC1O00264 195 aaKnown RBP17.62■□□□□ 0.41
MUC1-224ENST00000611577 CASC3O15234 703 aaKnown RBP17.62■□□□□ 0.41
MUC1-224ENST00000611577 TNFSF15O95150 251 aa17.62■□□□□ 0.41
MUC1-224ENST00000611577 IFNB1P01574 187 aa17.62■□□□□ 0.41
MUC1-224ENST00000611577 TRBC1P01850 177 aa17.62■□□□□ 0.41
MUC1-224ENST00000611577 PSMB4P28070 264 aa17.62■□□□□ 0.41
MUC1-224ENST00000611577 STIP1P31948 543 aaKnown RBP17.62■□□□□ 0.41
MUC1-224ENST00000611577 THOP1P52888 689 aa17.62■□□□□ 0.41
MUC1-224ENST00000611577 PFN3P60673 137 aa17.62■□□□□ 0.41
MUC1-224ENST00000611577 CLN3Q13286 438 aa17.62■□□□□ 0.41
MUC1-224ENST00000611577 MPP3Q13368 585 aa17.62■□□□□ 0.41
MUC1-224ENST00000611577 C1orf61Q13536 156 aa17.62■□□□□ 0.41
MUC1-224ENST00000611577 CCNG2Q16589 344 aa17.62■□□□□ 0.41
MUC1-224ENST00000611577 PRRT3Q5FWE3 981 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms