RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 CD9P21926 228 aa27.92■■■□□ 2.06
CSPG5-205ENST00000610462 RETSATQ6NUM9 610 aa27.92■■■□□ 2.06
CSPG5-205ENST00000610462 TMC8Q8IU68 726 aa27.92■■■□□ 2.06
CSPG5-205ENST00000610462 DSELQ8IZU8 1212 aa27.92■■■□□ 2.06
CSPG5-205ENST00000610462 CPXM2Q8N436 756 aa27.92■■■□□ 2.06
CSPG5-205ENST00000610462 TTC16Q8NEE8 873 aa27.92■■■□□ 2.06
CSPG5-205ENST00000610462 DNAJC9Q8WXX5 260 aa27.92■■■□□ 2.06
CSPG5-205ENST00000610462 RCN3Q96D15 328 aa27.92■■■□□ 2.06
CSPG5-205ENST00000610462 ZNF333Q96JL9 665 aa27.92■■■□□ 2.06
CSPG5-205ENST00000610462 LRRC3Q9BY71 257 aa27.92■■■□□ 2.06
CSPG5-205ENST00000610462 POMPQ9Y244 141 aa27.92■■■□□ 2.06
CSPG5-205ENST00000610462 ZNF711Q9Y462 761 aa27.92■■■□□ 2.06
CSPG5-205ENST00000610462 CCDC189A1A4V9 331 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 TRIM43BA6NCK2 446 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 TSPAN8P19075 237 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 CLCN4P51793 760 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 MUM1Q2TAK8 710 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 AARS2Q5JTZ9 985 aaKnown RBP27.91■■■□□ 2.06
CSPG5-205ENST00000610462 HPS6Q86YV9 775 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 NKAPQ8N5F7 415 aaKnown RBP27.91■■■□□ 2.06
CSPG5-205ENST00000610462 JADE3Q92613 823 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 TRIM43Q96BQ3 446 aaPredicted RBP27.91■■■□□ 2.06
CSPG5-205ENST00000610462 MAGEE1Q9HCI5 957 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 IL17CQ9P0M4 197 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 CFAP97Q9P2B7 532 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 SH3BP1Q9Y3L3 701 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 K7ERQ8 282 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 VPS26AO75436 327 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 LRG1P02750 347 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 ACRP10323 421 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 ERFP50548 548 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 PFKFB4Q16877 469 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 ARMC12Q5T9G4 340 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 PLCD3Q8N3E9 789 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 MYO19Q96H55 970 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 RNF112Q9ULX5 631 aa27.91■■■□□ 2.06
CSPG5-205ENST00000610462 PGLSO95336 258 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 HSPA1AP0DMV8 641 aaKnown RBP27.9■■■□□ 2.06
CSPG5-205ENST00000610462 HSPA1BP0DMV9 641 aaKnown RBP27.9■■■□□ 2.06
CSPG5-205ENST00000610462 CLNS1AP54105 237 aaKnown RBP27.9■■■□□ 2.06
CSPG5-205ENST00000610462 CCNIQ14094 377 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 CLEC6AQ6EIG7 209 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 CLYBLQ8N0X4 340 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 S100A14Q9HCY8 104 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 PKP3Q9Y446 797 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 OR1I1O60431 355 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 SIX3O95343 332 aaPredicted RBP27.9■■■□□ 2.06
CSPG5-205ENST00000610462 GFAPP14136 432 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 ATP6V1C1P21283 382 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 CDH13P55290 713 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 XIAPP98170 497 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 MPPE1Q53F39 396 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 CTSL3PQ5NE16 218 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 BBS7Q8IWZ6 715 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 EFCAB3Q8N7B9 438 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 PIH1D2Q8WWB5 315 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 ACDQ96AP0 544 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 CCDC124Q96CT7 223 aaKnown RBP27.9■■■□□ 2.06
CSPG5-205ENST00000610462 GPR63Q9BZJ6 419 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 TM6SF2Q9BZW4 377 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 EFCAB1Q9HAE3 211 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 NDE1Q9NXR1 346 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 GALPQ9UBC7 116 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 IKZF3Q9UKT9 509 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 FNDC3AQ9Y2H6 1198 aaKnown RBP27.9■■■□□ 2.06
CSPG5-205ENST00000610462 COMMD10Q9Y6G5 202 aa27.9■■■□□ 2.06
CSPG5-205ENST00000610462 A0A0U1RQS6 177 aa27.89■■■□□ 2.06
CSPG5-205ENST00000610462 UBDO15205 165 aa27.89■■■□□ 2.06
CSPG5-205ENST00000610462 SH3BP2P78314 561 aa27.89■■■□□ 2.06
CSPG5-205ENST00000610462 SQLEQ14534 574 aa27.89■■■□□ 2.06
CSPG5-205ENST00000610462 MPP7Q5T2T1 576 aa27.89■■■□□ 2.06
CSPG5-205ENST00000610462 PPFIBP2Q8ND30 876 aa27.89■■■□□ 2.06
CSPG5-205ENST00000610462 SERPINI1Q99574 410 aa27.89■■■□□ 2.06
CSPG5-205ENST00000610462 C11orf49Q9H6J7 331 aa27.89■■■□□ 2.06
CSPG5-205ENST00000610462 SUPT3HB4E1H0 165 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 SMAD6O43541 496 aaKnown RBP27.88■■■□□ 2.05
CSPG5-205ENST00000610462 SUPT3HO75486 399 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 BAIAP3O94812 1187 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 CDK14O94921 469 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 FGF4P08620 206 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 CTPS1P17812 591 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 HMGCLP35914 325 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 ADARP55265 1226 aaKnown RBP27.88■■■□□ 2.05
CSPG5-205ENST00000610462 UGT3A2Q3SY77 523 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 LILRA6Q6PI73 481 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 SLC30A3Q99726 388 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 TRMT6Q9UJA5 497 aaKnown RBP27.88■■■□□ 2.05
CSPG5-205ENST00000610462 TRAV19A0A0A6YYK7 116 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 LRRC14BA6NHZ5 514 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 NIPSNAP2O75323 286 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 PRAMEF12O95522 483 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 RAG1P15918 1043 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 ACADSP16219 412 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 PTGER3P43115 390 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 CACNG1Q06432 222 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 TSNQ15631 228 aaKnown RBP27.88■■■□□ 2.05
CSPG5-205ENST00000610462 PPP1R3AQ16821 1122 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 TCHHL1Q5QJ38 904 aaPredicted RBP27.88■■■□□ 2.05
CSPG5-205ENST00000610462 CYHR1Q6ZMK1 362 aa27.88■■■□□ 2.05
CSPG5-205ENST00000610462 CCDC149Q6ZUS6 474 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms