RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ABI1Q8IZP0 508 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 SEMA3CQ99985 751 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 UTS2RQ9UKP6 389 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 ST3GAL5Q9UNP4 418 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 CORINQ9Y5Q5 1042 aa20.34■□□□□ 0.85
SSBP3-216ENST00000610401 IQCF5A8MTL0 148 aa20.33■□□□□ 0.85
SSBP3-216ENST00000610401 XYLBO75191 536 aa20.33■□□□□ 0.85
SSBP3-216ENST00000610401 RHOBTB1O94844 696 aa20.33■□□□□ 0.85
SSBP3-216ENST00000610401 KCNE1P15382 129 aa20.33■□□□□ 0.85
SSBP3-216ENST00000610401 GRK4P32298 578 aa20.33■□□□□ 0.85
SSBP3-216ENST00000610401 ADRA1AP35348 466 aa20.33■□□□□ 0.85
SSBP3-216ENST00000610401 OR4D2P58180 307 aa20.33■□□□□ 0.85
SSBP3-216ENST00000610401 PHEXP78562 749 aa20.33■□□□□ 0.85
SSBP3-216ENST00000610401 CCL14Q16627 93 aa20.33■□□□□ 0.85
SSBP3-216ENST00000610401 ZBED5Q49AG3 693 aa20.33■□□□□ 0.85
SSBP3-216ENST00000610401 RAP1GAP2Q684P5 730 aa20.33■□□□□ 0.85
SSBP3-216ENST00000610401 GALNT18Q6P9A2 607 aa20.33■□□□□ 0.85
SSBP3-216ENST00000610401 PIWIL3Q7Z3Z3 882 aaKnown RBP20.33■□□□□ 0.85
SSBP3-216ENST00000610401 MILR1Q7Z6M3 343 aa20.33■□□□□ 0.85
SSBP3-216ENST00000610401 ADGRG5Q8IZF4 528 aa20.33■□□□□ 0.85
SSBP3-216ENST00000610401 SMURF2Q9HAU4 748 aa20.33■□□□□ 0.85
SSBP3-216ENST00000610401 PLGRKTQ9HBL7 147 aa20.33■□□□□ 0.85
SSBP3-216ENST00000610401 ASB1Q9Y576 335 aa20.33■□□□□ 0.85
SSBP3-216ENST00000610401 CCDC162PA2VCL2 907 aa20.33■□□□□ 0.84
SSBP3-216ENST00000610401 SLC2A3P11169 496 aa20.33■□□□□ 0.84
SSBP3-216ENST00000610401 KCNK10P57789 538 aa20.33■□□□□ 0.84
SSBP3-216ENST00000610401 HERVK_113P63132 956 aa20.33■□□□□ 0.84
SSBP3-216ENST00000610401 SGO1Q5FBB7 561 aa20.33■□□□□ 0.84
SSBP3-216ENST00000610401 CNTN4Q8IWV2 1026 aa20.33■□□□□ 0.84
SSBP3-216ENST00000610401 FNDC5Q8NAU1 212 aa20.33■□□□□ 0.84
SSBP3-216ENST00000610401 CHID1Q9BWS9 393 aa20.33■□□□□ 0.84
SSBP3-216ENST00000610401 ERVK-6Q9BXR3 956 aa20.33■□□□□ 0.84
SSBP3-216ENST00000610401 ABCG8Q9H221 673 aa20.33■□□□□ 0.84
SSBP3-216ENST00000610401 CATSPERBQ9H7T0 1116 aa20.33■□□□□ 0.84
SSBP3-216ENST00000610401 PRM3Q9NNZ6 103 aa20.33■□□□□ 0.84
SSBP3-216ENST00000610401 OSER1Q9NX31 292 aa20.33■□□□□ 0.84
SSBP3-216ENST00000610401 NPEPPSL1A6NEC2 478 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 ITGB6P18564 788 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 RPS9P46781 194 aaKnown RBP20.32■□□□□ 0.84
SSBP3-216ENST00000610401 DNAJB13P59910 316 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 TRAP1Q12931 704 aaKnown RBP20.32■□□□□ 0.84
SSBP3-216ENST00000610401 CBX3Q13185 183 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 RAB44Q7Z6P3 723 aaPredicted RBP20.32■□□□□ 0.84
SSBP3-216ENST00000610401 SMYD1Q8NB12 490 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 FIG4Q92562 907 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 IL12RB2Q99665 862 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 BTN3A1O00481 513 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 IRAK2O43187 625 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 OCM2P0CE71 109 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 OCMP0CE72 109 aaPredicted RBP20.32■□□□□ 0.84
SSBP3-216ENST00000610401 ACVRL1P37023 503 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 GRAMD4Q6IC98 578 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 BTLAQ7Z6A9 289 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 FAR2Q96K12 515 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 PPP1R10Q96QC0 940 aaKnown RBP20.32■□□□□ 0.84
SSBP3-216ENST00000610401 SPON2Q9BUD6 331 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 AGPAT4Q9NRZ5 378 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 TRNAU1APQ9NX07 287 aaKnown RBP20.32■□□□□ 0.84
SSBP3-216ENST00000610401 RNF181Q9P0P0 153 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 IFT80Q9P2H3 777 aaPredicted RBP20.32■□□□□ 0.84
SSBP3-216ENST00000610401 RRN3P2A6NIE6 340 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 K7EPI3 171 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 NOL3O60936 208 aaKnown RBP20.32■□□□□ 0.84
SSBP3-216ENST00000610401 BMP2P12643 396 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 LHX1P48742 406 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 HCAR3P49019 387 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 CARTPTQ16568 116 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 RMDN1Q96DB5 314 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 CENPNQ96H22 339 aaPredicted RBP20.32■□□□□ 0.84
SSBP3-216ENST00000610401 UBXN10Q96LJ8 280 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 EPS8L2Q9H6S3 715 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 TBC1D23Q9NUY8 699 aa20.32■□□□□ 0.84
SSBP3-216ENST00000610401 GLP2RO95838 553 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 TCF3P15923 654 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 LBPP18428 481 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 RXRGP48443 463 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 CLCN5P51795 746 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 SELPLGQ14242 412 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 USP41Q3LFD5 358 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 ABRAXAS1Q6UWZ7 409 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 SAPCD2Q86UD0 394 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 SLC22A9Q8IVM8 553 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 EFHBQ8N7U6 833 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 ANKFN1Q8N957 763 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 CCDC126Q96EE4 140 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 RTP3Q9BQQ7 232 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 KATNBL1Q9H079 304 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.31■□□□□ 0.845e-7■■■□□ 16.6
SSBP3-216ENST00000610401 ZMYM5Q9UJ78 669 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 ZNF510Q9Y2H8 683 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 CCDC154A6NI56 674 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 ALBP02768 609 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 HK2P52789 917 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 CLCQ05315 142 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 FPGSQ05932 587 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 FAM45BPQ6NSW5 357 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 FBXO39Q8N4B4 442 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 FAM86B1Q8N7N1 296 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 FAM45AQ8TCE6 357 aa20.31■□□□□ 0.84
SSBP3-216ENST00000610401 DPF3Q92784 378 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms