RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 KCNK13Q9HB14 408 aa19.11■□□□□ 0.65
TUBB4B-202ENST00000604929 CLDND1Q9NY35 253 aa19.11■□□□□ 0.65
TUBB4B-202ENST00000604929 OBP2AQ9NY56 170 aa19.11■□□□□ 0.65
TUBB4B-202ENST00000604929 PRUNE2Q8WUY3 3088 aa19.11■□□□□ 0.65
TUBB4B-202ENST00000604929 GAPDHSO14556 408 aaPredicted RBP19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 TBX10O75333 385 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 TGDSO95455 350 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 SRPRAP08240 638 aaKnown RBP19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 HOXB8P17481 243 aaPredicted RBP19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 PDAP1Q13442 181 aaKnown RBP19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 RUNX3Q13761 415 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 PDGFRLQ15198 375 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 TSNAXIP1Q2TAA8 658 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 ZYG11AQ6WRX3 759 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 PLPP6Q8IY26 295 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 GPR26Q8NDV2 337 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 WFIKKN2Q8TEU8 576 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 LYSMD1Q96S90 227 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 MRPL46Q9H2W6 279 aaKnown RBP19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 B4GALT6Q9UBX8 382 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 IL36AQ9UHA7 158 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 MED16Q9Y2X0 877 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 PPIL1Q9Y3C6 166 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 USH1CQ9Y6N9 552 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 DOCK8Q8NF50 2099 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 TBC1D3BA6NDS4 549 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 NEMP2A6NFY4 417 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 IQCF5A8MTL0 148 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 DLX3O60479 287 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 ASLP04424 464 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 LAMP2P13473 410 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 BMP8BP34820 402 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 POLR2LP62875 67 aaKnown RBP19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 FCHO2Q0JRZ9 810 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 CHRNA6Q15825 494 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 DBN1Q16643 649 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 TTC7BQ86TV6 843 aa19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 MRPL57Q9BQC6 102 aaKnown RBP19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 CORO1CQ9ULV4 474 aaPredicted RBP19.1■□□□□ 0.65
TUBB4B-202ENST00000604929 GLYATL1P3A0A0U1RQE8 302 aa19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 PFDN6O15212 129 aa19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 NIPSNAP2O75323 286 aa19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 IL1BP01584 269 aa19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 PSMC3P17980 439 aa19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 CHRM3P20309 590 aa19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 GRK2P25098 689 aa19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 KCNC1P48547 511 aa19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 ARFIP2P53365 341 aa19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 NAGLUP54802 743 aa19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 ABCE1P61221 599 aaKnown RBP19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 FNDC3BQ53EP0 1204 aaKnown RBP19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 SETMARQ53H47 684 aaPredicted RBP19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 KLC3Q6P597 504 aa19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 PAQR3Q6TCH7 311 aa19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 SERPINA9Q86WD7 417 aa19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 GATA5Q9BWX5 397 aaPredicted RBP19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 ABCG8Q9H221 673 aa19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 ALG9Q9H6U8 611 aa19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 TAS2R13Q9NYV9 303 aa19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 CD84Q9UIB8 345 aa19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 DNAJC16Q9Y2G8 782 aa19.09■□□□□ 0.65
TUBB4B-202ENST00000604929 WISP3O95389 354 aaPredicted RBP19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 PKMP14618 531 aaKnown RBP19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 TFEBP19484 476 aa19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 GDI1P31150 447 aa19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 GJA4P35212 333 aa19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 CCR10P46092 362 aa19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 NFATC2Q13469 925 aa19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 ACAP2Q15057 778 aa19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 AARS2Q5JTZ9 985 aaKnown RBP19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 CTSL3PQ5NE16 218 aa19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 YTHDF3Q7Z739 585 aaKnown RBP19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 OR6Y1Q8NGX8 325 aa19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 RDH11Q8TC12 318 aa19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 ZNF398Q8TD17 642 aa19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 PBXIP1Q96AQ6 731 aa19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 MCCC1Q96RQ3 725 aaPredicted RBP19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 SORT1Q99523 831 aa19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 GPR21Q99679 349 aa19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 SLC30A3Q99726 388 aa19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 BOCQ9BWV1 1114 aa19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 TMEM120AQ9BXJ8 343 aa19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 PNPOQ9NVS9 261 aa19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 APPL1Q9UKG1 709 aa19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 VPS9D1Q9Y2B5 631 aa19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 RRP15Q9Y3B9 282 aaKnown RBP19.08■□□□□ 0.65
TUBB4B-202ENST00000604929 ZBTB14O43829 449 aa19.08■□□□□ 0.64
TUBB4B-202ENST00000604929 ZNF37AP17032 561 aaPredicted RBP19.08■□□□□ 0.64
TUBB4B-202ENST00000604929 PTGER3P43115 390 aa19.08■□□□□ 0.64
TUBB4B-202ENST00000604929 LIPMQ5VYY2 423 aa19.08■□□□□ 0.64
TUBB4B-202ENST00000604929 BRAT1Q6PJG6 821 aa19.08■□□□□ 0.64
TUBB4B-202ENST00000604929 SNX20Q7Z614 316 aa19.08■□□□□ 0.64
TUBB4B-202ENST00000604929 ISCA2Q86U28 154 aa19.08■□□□□ 0.64
TUBB4B-202ENST00000604929 SREK1Q8WXA9 508 aaKnown RBP19.08■□□□□ 0.64
TUBB4B-202ENST00000604929 PLCD4Q9BRC7 762 aa19.08■□□□□ 0.64
TUBB4B-202ENST00000604929 KDM4CQ9H3R0 1056 aa19.08■□□□□ 0.64
TUBB4B-202ENST00000604929 POMKQ9H5K3 350 aa19.08■□□□□ 0.64
TUBB4B-202ENST00000604929 SARS2Q9NP81 518 aaKnown RBP19.08■□□□□ 0.64
TUBB4B-202ENST00000604929 MID2Q9UJV3 735 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms