RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 OXTRP30559 389 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 NNMTP40261 264 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 DPP6P42658 865 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 ETV4P43268 484 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 CHRNA4P43681 627 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 RGRP47804 291 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 GRIA4P48058 902 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 LEPRP48357 1165 aaKnown RBP11.51□□□□□ -0.57
ZNF548-211ENST00000600927 LIMK1P53667 647 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 RPL6Q02878 288 aaKnown RBP11.51□□□□□ -0.57
ZNF548-211ENST00000600927 CREB5Q02930 508 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 BCL2L1Q07817 233 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 ELAVL3Q14576 367 aaKnown RBP11.51□□□□□ -0.57
ZNF548-211ENST00000600927 ARMC12Q5T9G4 340 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 LYSMD4Q5XG99 296 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 ZNF776Q68DI1 518 aaPredicted RBP11.51□□□□□ -0.57
ZNF548-211ENST00000600927 CES3Q6UWW8 571 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 CYP2U1Q7Z449 544 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 SPATS2Q86XZ4 545 aaKnown RBP11.51□□□□□ -0.57
ZNF548-211ENST00000600927 TMEFF1Q8IYR6 380 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 CADM4Q8NFZ8 388 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 RAB3IL1Q8TBN0 382 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 BCAS4Q8TDM0 211 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 HCAR2Q8TDS4 363 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 RMDN1Q96DB5 314 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 LRIG1Q96JA1 1093 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 SERAC1Q96JX3 654 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 RPL10LQ96L21 214 aaKnown RBP11.51□□□□□ -0.57
ZNF548-211ENST00000600927 ZNF778Q96MU6 729 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 ZNF641Q96N77 438 aaPredicted RBP11.51□□□□□ -0.57
ZNF548-211ENST00000600927 FAM129BQ96TA1 746 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 TCF12Q99081 682 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 GPR22Q99680 433 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 TRIM56Q9BRZ2 755 aaKnown RBP11.51□□□□□ -0.57
ZNF548-211ENST00000600927 IQCGQ9H095 443 aaKnown RBP11.51□□□□□ -0.57
ZNF548-211ENST00000600927 NSRP1Q9H0G5 558 aaKnown RBP11.51□□□□□ -0.57
ZNF548-211ENST00000600927 SMOC1Q9H4F8 434 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 TMEM74BQ9NUR3 256 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 NLE1Q9NVX2 485 aaPredicted RBP11.51□□□□□ -0.57
ZNF548-211ENST00000600927 EVLQ9UI08 416 aaPredicted RBP11.51□□□□□ -0.57
ZNF548-211ENST00000600927 PILRBQ9UKJ0 227 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 SCML1Q9UN30 329 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 ANKRD6Q9Y2G4 727 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 PLLPQ9Y342 182 aa11.51□□□□□ -0.57
ZNF548-211ENST00000600927 TRAFD1O14545 582 aaPredicted RBP11.5□□□□□ -0.57
ZNF548-211ENST00000600927 PFDN6O15212 129 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 BIRC5O15392 142 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 GLRA3O75311 464 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 PGLSO95336 258 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 PYGBP11216 843 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 SRCP12931 536 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 OGNP20774 298 aaKnown RBP11.5□□□□□ -0.57
ZNF548-211ENST00000600927 LPOP22079 712 aaPredicted RBP11.5□□□□□ -0.57
ZNF548-211ENST00000600927 ITPKAP23677 461 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 NFKBIAP25963 317 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 TYK2P29597 1187 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 RPA3P35244 121 aaPredicted RBP11.5□□□□□ -0.57
ZNF548-211ENST00000600927 SLC26A3P40879 764 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 DHPSP49366 369 aaPredicted RBP11.5□□□□□ -0.57
ZNF548-211ENST00000600927 SERPINB8P50452 374 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 CSRP3P50461 194 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 WDR4P57081 412 aaKnown RBP11.5□□□□□ -0.57
ZNF548-211ENST00000600927 PRAMEP78395 509 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 SF3A2Q15428 464 aaKnown RBP11.5□□□□□ -0.57
ZNF548-211ENST00000600927 CCDC6Q16204 474 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 PDK4Q16654 411 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 MROH9Q5TGP6 573 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 HHATQ5VTY9 493 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 TCEAL6Q6IPX3 200 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 MRNIPQ6NTE8 343 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 USP30Q70CQ3 517 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 SDCCAG8Q86SQ7 713 aaPredicted RBP11.5□□□□□ -0.57
ZNF548-211ENST00000600927 ZC3HC1Q86WB0 502 aaKnown RBP11.5□□□□□ -0.57
ZNF548-211ENST00000600927 CACUL1Q86Y37 369 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 SYT12Q8IV01 421 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 UNC5BQ8IZJ1 945 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 C4orf33Q8N1A6 199 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.5□□□□□ -0.57
ZNF548-211ENST00000600927 OR13J1Q8NGT2 312 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 NETO1Q8TDF5 533 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 TCP10LQ8TDR4 215 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 TCEAL3Q969E4 200 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 TOE1Q96GM8 510 aaKnown RBP11.5□□□□□ -0.57
ZNF548-211ENST00000600927 LYSMD1Q96S90 227 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 CCT8L2Q96SF2 557 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 PCED1AQ9H1Q7 454 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 ATP13A3Q9H7F0 1226 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 RXFP3Q9NSD7 469 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 IARS2Q9NSE4 1012 aaKnown RBP11.5□□□□□ -0.57
ZNF548-211ENST00000600927 FBXO5Q9UKT4 447 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 CHKBQ9Y259 395 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 VPS9D1Q9Y2B5 631 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 THADAQ6YHU6 1953 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 PCDH15Q96QU1 1955 aa11.5□□□□□ -0.57
ZNF548-211ENST00000600927 LNP1A1A4G5 178 aa11.49□□□□□ -0.57
ZNF548-211ENST00000600927 KLF11O14901 512 aa11.49□□□□□ -0.57
ZNF548-211ENST00000600927 MAP3K13O43283 966 aa11.49□□□□□ -0.57
ZNF548-211ENST00000600927 GDF9O60383 454 aa11.49□□□□□ -0.57
ZNF548-211ENST00000600927 UGT1A9O60656 530 aa11.49□□□□□ -0.57
ZNF548-211ENST00000600927 SPAG7O75391 227 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms