RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 SPINT3P49223 89 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 CARSP49589 748 aaKnown RBP11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 LIG3P49916 1009 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 ZNF140P52738 457 aaPredicted RBP11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 SESN2P58004 480 aaPredicted RBP11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 DCDC1P59894 354 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 FRG1Q14331 258 aaKnown RBP11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 FNBP1LQ5T0N5 605 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 CENPUQ71F23 418 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 ZNF765Q7L2R6 523 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 LYSMD3Q7Z3D4 306 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 GLT6D1Q7Z4J2 308 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 TECPR1Q7Z6L1 1165 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 RAB44Q7Z6P3 723 aaPredicted RBP11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 TMEM135Q86UB9 458 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 TSPAN33Q86UF1 283 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 PROSER1Q86XN7 944 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 DENND6BQ8NEG7 585 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 PPHLN1Q8NEY8 458 aaKnown RBP11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 BLOC1S5Q8TDH9 187 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 CXorf40AQ8TE69 158 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 EID2BQ96D98 161 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 COQ10AQ96MF6 247 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 LENG8Q96PV6 779 aaPredicted RBP11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 FMO2Q99518 471 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 GTPBP2Q9BX10 602 aaKnown RBP11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 GPR63Q9BZJ6 419 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 RAB21Q9UL25 225 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 SLC6A14Q9UN76 642 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 CYP8B1Q9UNU6 501 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 TEX264Q9Y6I9 313 aa11.62□□□□□ -0.55
CHMP2A-207ENST00000600804 AURKAO14965 403 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 MAP3K13O43283 966 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 CTIFO43310 598 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 TM7SF2O76062 418 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 USP1O94782 785 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 CLDN7O95471 211 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 PRKCGP05129 697 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 CFIP05156 583 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 PYGLP06737 847 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 C1SP09871 688 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 C6P13671 934 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 TSHRP16473 764 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 TPH1P17752 444 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 GM2AP17900 193 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 MGAT1P26572 445 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 TEAD1P28347 426 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 HADHAP40939 763 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 RPL6Q02878 288 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 DPTQ07507 201 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 DHX9Q08211 1270 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 POU6F1Q14863 301 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 SKIDA1Q1XH10 827 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 ERCC6LQ2NKX8 1250 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 ZNF284Q2VY69 593 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 MSS51Q4VC12 460 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 CCDC38Q502W7 563 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 LRRC73Q5JTD7 316 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 TSTD2Q5T7W7 516 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 PDPK2PQ6A1A2 396 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 CCNI2Q6ZMN8 369 aaPredicted RBP11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 AGGF1Q8N302 714 aaeCLIP11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 MINDY1Q8N5J2 469 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 IFT81Q8WYA0 676 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 FOXJ1Q92949 421 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 DTD2Q96FN9 168 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 PLEKHG4BQ96PX9 1271 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 SMIM14Q96QK8 99 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 EBNA1BP2Q99848 306 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 C1QTNF7Q9BXJ2 289 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 SLC32A1Q9H598 525 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 TREX1Q9NSU2 369 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 NLE1Q9NVX2 485 aaPredicted RBP11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 SYBUQ9NX95 663 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 PKD2L2Q9NZM6 624 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 GGT7Q9UJ14 662 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 ZFR2Q9UPR6 939 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 ITM2BQ9Y287 266 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 PKP3Q9Y446 797 aa11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 URB1O60287 2271 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-207ENST00000600804 ASH1LQ9NR48 2969 aaKnown RBP11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 TENM4Q6N022 2769 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 TBC1D3DA0A087WVF3 549 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 TBC1D3IA0A087WXS9 549 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 TBC1D3EA0A087X179 549 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 TBC1D3KA0A087X1G2 549 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 A0A1W2PQU0 124 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 TBC1D3FA6NER0 549 aaPredicted RBP11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 TBC1D3LB9A6J9 549 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 WNT9AO14904 365 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 STX7O15400 261 aaKnown RBP11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 MMP20O60882 483 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 RNGTTO60942 597 aaKnown RBP11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 PCDH8O95206 1070 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 GSTA2P09210 222 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 TBC1D3HP0C7X1 549 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 PIRTP0C851 137 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 PGAM1P18669 254 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 TERF1P54274 439 aa11.6□□□□□ -0.55
CHMP2A-207ENST00000600804 PDIA2Q13087 525 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms