RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 EBNA1BP2Q99848 306 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 C19orf43Q9BQ61 176 aa19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 SPATA16Q9BXB7 569 aa19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 PLAC1Q9HBJ0 212 aa19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 TMPRSS11EQ9UL52 423 aa19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 RAB23Q9ULC3 237 aa19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 TEX264Q9Y6I9 313 aa19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 GLYATL1P3A0A0U1RQE8 302 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 FAM237BA0A1B0GVD1 139 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 OR51F1A6NGY5 319 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 H7C0S8 307 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 BCAT2O15382 392 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 UGT1A9O60656 530 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 PRSS56P0CW18 603 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 UGT1A6P19224 532 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 UGT1A1P22309 533 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 UGT1A4P22310 534 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 MC4RP32245 332 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 UGT1A3P35503 534 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 UGT1A5P35504 534 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 HADHAP40939 763 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 CUL1Q13616 776 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 STAT4Q14765 748 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 SKIDA1Q1XH10 827 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 ANKRD20A4Q4UJ75 823 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 TPRG1LQ5T0D9 272 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 ZDHHC20Q5W0Z9 365 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 CENPUQ71F23 418 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 TMEM135Q86UB9 458 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 SYT12Q8IV01 421 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 OR13H1Q8NG92 308 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 PEX13Q92968 403 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 HDAC10Q969S8 669 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 FUBP1Q96AE4 644 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 CDH19Q9H159 772 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 UGT1A7Q9HAW7 530 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 UGT1A10Q9HAW8 530 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 UGT1A8Q9HAW9 530 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 SAYSD1Q9NPB0 183 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 SAMD15Q9P1V8 674 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 CNOT6Q9ULM6 557 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 NFU1Q9UMS0 254 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 OR1A2Q9Y585 309 aa19.9■□□□□ 0.78
SHKBP1-222ENST00000600320 MAGEB16A2A368 324 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 A6NNZ2 444 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 EIF3HO15372 352 aaKnown RBP eCLIP19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 SRP72O76094 671 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 TSHRP16473 764 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 PGAM1P18669 254 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 ARNTP27540 789 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 TEAD1P28347 426 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 CD38P28907 300 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 SMAD1Q15797 465 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 ERCC6LQ2NKX8 1250 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 ATP13A5Q4VNC0 1218 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 ARMC3Q5W041 872 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 LAIR1Q6GTX8 287 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 Q6ZSR6 202 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 PTAR1Q7Z6K3 402 aaPredicted RBP19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 CCDC25Q86WR0 208 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 HEATR4Q86WZ0 1026 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 GSPT2Q8IYD1 628 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 FBXO36Q8NEA4 188 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 DTX3LQ8TDB6 740 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 UBXN4Q92575 508 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 LRRC39Q96DD0 335 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 APOOQ9BUR5 198 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 LGR4Q9BXB1 951 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 FAM129AQ9BZQ8 928 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 FOXP3Q9BZS1 431 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 ARRDC1-AS1Q9H2J1 176 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 SEMA4AQ9H3S1 761 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 FAM96AQ9H5X1 160 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 RPS6KL1Q9Y6S9 549 aa19.89■□□□□ 0.77
SHKBP1-222ENST00000600320 A0A1B0GTW7 788 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 ZCWPW2A0A1B0GU75 182 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 PATE3B3GLJ2 98 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 INPP4BO15327 924 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 USP1O94782 785 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 PRAMEF1O95521 474 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 GOT2P00505 430 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 FOXN2P32314 431 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 TRIM23P36406 574 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 CSNK1EP49674 416 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 CDKN1CP49918 316 aaPredicted RBP19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 CDK3Q00526 305 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 NAA30Q147X3 362 aaPredicted RBP19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 CCDC6Q16204 474 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 ADAMTSL4Q6UY14 1074 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 TRIM74Q86UV6 250 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 ZBED8Q8IZ13 594 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 PNPLA1Q8N8W4 532 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 MFSD2AQ8NA29 543 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 ZNF398Q8TD17 642 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 CFAP36Q96G28 342 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 ZSCAN5AQ9BUG6 496 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 TEX101Q9BY14 249 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 PHACTR1Q9C0D0 580 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 SMOC1Q9H4F8 434 aa19.88■□□□□ 0.77
SHKBP1-222ENST00000600320 GPR27Q9NS67 375 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms