RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	TTC30B	Q8N4P2	665 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	CEP76	Q8TAP6	659 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	STYX	Q8WUJ0	223 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	CENPT	Q96BT3	561 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	EID2B	Q96D98	161 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	CHRAC1	Q9NRG0	131 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	ZC3H7B	Q9UGR2	993 aa	Known RBP	21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	RIMKLB	Q9ULI2	386 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	PKP3	Q9Y446	797 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	ARL5A	Q9Y689	179 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	GPR179	Q6PRD1	2367 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	UQCRHL	A0A096LP55	91 aa		21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026		H0Y8X5	98 aa		21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	FPGT	O14772	594 aa		21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	LDB2	O43679	373 aa		21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	WNT1	P04628	370 aa		21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	CFI	P05156	583 aa		21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	UQCRH	P07919	91 aa		21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	CD38	P28907	300 aa		21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	HMGCL	P35914	325 aa		21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	AFF3	P51826	1226 aa	Known RBP	21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	TRIM61	Q5EBN2	209 aa		21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	TSTD2	Q5T7W7	516 aa		21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	KDM7A	Q6ZMT4	941 aa		21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	AGGF1	Q8N302	714 aa	eCLIP	21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	DCLK2	Q8N568	766 aa		21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	AEN	Q8WTP8	325 aa	Known RBP	21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	PEX13	Q92968	403 aa		21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	CFAP36	Q96G28	342 aa		21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	TTC25	Q96NG3	672 aa		21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	PKD2L2	Q9NZM6	624 aa		21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	CD84	Q9UIB8	345 aa		21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	HS3ST3A1	Q9Y663	406 aa		21.87	■■□□□ 1.09
LTBP4-227	ENST00000600026	CCDC151	A5D8V7	595 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	MROH6	A6NGR9	719 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	PCCB	P05166	539 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	PAM	P19021	973 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	SPINT3	P49223	89 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	CSNK1E	P49674	416 aa	Known RBP	21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	FASTKD3	Q14CZ7	662 aa	Known RBP	21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	TEAD4	Q15561	434 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	TCEAL6	Q6IPX3	200 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	SLC23A3	Q6PIS1	610 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	KYAT3	Q6YP21	454 aa	Known RBP	21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	ABI3BP	Q7Z7G0	1075 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	IGDCC3	Q8IVU1	814 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	RAVER1	Q8IY67	606 aa	Known RBP	21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	MFSD2A	Q8NA29	543 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	TCEAL3	Q969E4	200 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	ZNF669	Q96BR6	464 aa	Predicted RBP	21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	BMF	Q96LC9	184 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	C9orf72	Q96LT7	481 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	C19orf43	Q9BQ61	176 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	ABCG8	Q9H221	673 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	CAPN10	Q9HC96	672 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	PARD6A	Q9NPB6	346 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	RAD18	Q9NS91	495 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	ARGLU1	Q9NWB6	273 aa	Predicted RBP	21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	KCTD5	Q9NXV2	234 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	RPS6KL1	Q9Y6S9	549 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026	OTOGL	Q3ZCN5	2332 aa		21.86	■■□□□ 1.09
LTBP4-227	ENST00000600026		A0A1B0GVT2	93 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	CCDC78	A2IDD5	438 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	POM121B	A6NF01	834 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026		A6NNZ2	444 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	BUD23	O43709	281 aa	Known RBP	21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	LRP3	O75074	770 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	USP1	O94782	785 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	GSTA2	P09210	222 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	HADHA	P40939	763 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	ZNF140	P52738	457 aa	Predicted RBP	21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	PMS2	P54278	862 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	FOXK2	Q01167	660 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	ANKRD20A4	Q4UJ75	823 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	SPANXN3	Q5MJ09	141 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	ZDHHC20	Q5W0Z9	365 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	ESRP1	Q6NXG1	681 aa	Known RBP	21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	TRMT10C	Q7L0Y3	403 aa	Known RBP	21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	ZNF765	Q7L2R6	523 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	PTAR1	Q7Z6K3	402 aa	Predicted RBP	21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	NRSN1	Q8IZ57	195 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	PELI3	Q8N2H9	469 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	PLA2G15	Q8NCC3	412 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	OR4K2	Q8NGD2	314 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	CDC42EP4	Q9H3Q1	356 aa	Known RBP	21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	FSCN3	Q9NQT6	498 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	SEMA4G	Q9NTN9	838 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	NLE1	Q9NVX2	485 aa	Predicted RBP	21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	IL17C	Q9P0M4	197 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	SLC6A14	Q9UN76	642 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	KCTD3	Q9Y597	815 aa		21.85	■■□□□ 1.09
LTBP4-227	ENST00000600026	RGSL1	A5PLK6	1076 aa		21.84	■■□□□ 1.09
LTBP4-227	ENST00000600026	KHNYN	O15037	678 aa	Known RBP	21.84	■■□□□ 1.09
LTBP4-227	ENST00000600026	VILL	O15195	856 aa		21.84	■■□□□ 1.09
LTBP4-227	ENST00000600026	SPAG6	O75602	509 aa		21.84	■■□□□ 1.09
LTBP4-227	ENST00000600026	ZNF806	P0C7X5	589 aa		21.84	■■□□□ 1.09
LTBP4-227	ENST00000600026	THEGL	P0DJG4	465 aa		21.84	■■□□□ 1.09
LTBP4-227	ENST00000600026	TSHR	P16473	764 aa		21.84	■■□□□ 1.09
LTBP4-227	ENST00000600026	NMBR	P28336	390 aa		21.84	■■□□□ 1.09
LTBP4-227	ENST00000600026	PFN3	P60673	137 aa		21.84	■■□□□ 1.09

Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms