RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 KIAA1328Q86T90 577 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 MAML1Q92585 1016 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 RBM22Q9NW64 420 aaKnown RBP eCLIP18.66■□□□□ 0.581e-9■■■□□ 15.2
PNKP-213ENST00000599543 DNPEPQ9ULA0 475 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 A0A0J9YYE9 177 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 ECEL1O95672 775 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 CPNE6O95741 557 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 TRBC1P01850 177 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 FGF1P05230 155 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 PYGLP06737 847 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 IVLP07476 585 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 KRT7P08729 469 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 COMTP21964 271 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 ALDH4A1P30038 563 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 POLD2P49005 469 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 CTBSQ01459 385 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 DSC2Q02487 901 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 AMZ1Q400G9 498 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 ADAMTSL4Q6UY14 1074 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 PIM3Q86V86 326 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 ZNF843Q8N446 348 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 PTCD2Q8WV60 388 aaKnown RBP18.65■□□□□ 0.58
PNKP-213ENST00000599543 FATE1Q969F0 183 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 WBP1Q96G27 269 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 CCNL2Q96S94 520 aaPredicted RBP18.65■□□□□ 0.58
PNKP-213ENST00000599543 TDRD1Q9BXT4 1180 aaKnown RBP18.65■□□□□ 0.58
PNKP-213ENST00000599543 RDH14Q9HBH5 336 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 AMACRQ9UHK6 382 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 LCMT1Q9UIC8 334 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 ACSL6Q9UKU0 697 aa18.65■□□□□ 0.58
PNKP-213ENST00000599543 CAPN8A6NHC0 703 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 NVLO15381 856 aaKnown RBP18.64■□□□□ 0.57
PNKP-213ENST00000599543 SOD1P00441 154 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 ITIH1P19827 911 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 MX2P20592 715 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 CCNCP24863 283 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 MAN1A1P33908 653 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 ADCY8P40145 1251 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 VAV2P52735 878 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 NAP1L1P55209 391 aaKnown RBP18.64■□□□□ 0.57
PNKP-213ENST00000599543 OR1D5P58170 312 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 B4GALNT1Q00973 533 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 PTSQ03393 145 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 TMPRSS9Q7Z410 1059 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 ZNF438Q7Z4V0 828 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 C17orf82Q86X59 251 aaPredicted RBP18.64■□□□□ 0.57
PNKP-213ENST00000599543 SLITRK4Q8IW52 837 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 SCAMP4Q969E2 229 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 ZNF830Q96NB3 372 aaPredicted RBP18.64■□□□□ 0.57
PNKP-213ENST00000599543 TSGA13Q96PP4 275 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 SMIM14Q96QK8 99 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 OR2M4Q96R27 311 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 ABCG8Q9H221 673 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 LUC7LQ9NQ29 371 aaKnown RBP18.64■□□□□ 0.57
PNKP-213ENST00000599543 AKAP7Q9P0M2 348 aaPredicted RBP18.64■□□□□ 0.57
PNKP-213ENST00000599543 CHKBQ9Y259 395 aa18.64■□□□□ 0.57
PNKP-213ENST00000599543 PRAMEF33A0A0G2JMD5 474 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 SPOPO43791 374 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 PRAMEF10O60809 474 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 HLA-DQB2P05538 268 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 ACTR1BP42025 376 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 ARHGAP25P42331 645 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 ACTR1AP61163 376 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 NR1D2Q14995 579 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 TCEAL1Q15170 157 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 KIAA1614Q5VZ46 1190 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 RFLNAQ6ZTI6 216 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 ZNF765Q7L2R6 523 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 ZNF605Q86T29 641 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 TRIM74Q86UV6 250 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 CCNYQ8ND76 341 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 LPCAT1Q8NF37 534 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 PATE1Q8WXA2 126 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 RAPGEF5Q92565 580 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 TTC9Q92623 222 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 FAF2Q96CS3 445 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 SEMA6CQ9H3T2 930 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 TMEM98Q9Y2Y6 226 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 ST14Q9Y5Y6 855 aa18.63■□□□□ 0.57
PNKP-213ENST00000599543 B4GAT1O43505 415 aa18.62■□□□□ 0.57
PNKP-213ENST00000599543 KRT1P04264 644 aa18.62■□□□□ 0.57
PNKP-213ENST00000599543 LIPCP11150 499 aa18.62■□□□□ 0.57
PNKP-213ENST00000599543 GPR3P46089 330 aa18.62■□□□□ 0.57
PNKP-213ENST00000599543 MARCKSL1P49006 195 aa18.62■□□□□ 0.57
PNKP-213ENST00000599543 STC1P52823 247 aa18.62■□□□□ 0.57
PNKP-213ENST00000599543 MAPK10P53779 464 aa18.62■□□□□ 0.57
PNKP-213ENST00000599543 RPL26P61254 145 aaKnown RBP18.62■□□□□ 0.57
PNKP-213ENST00000599543 GBE1Q04446 702 aa18.62■□□□□ 0.57
PNKP-213ENST00000599543 LLGL1Q15334 1064 aa18.62■□□□□ 0.57
PNKP-213ENST00000599543 CLPPQ16740 277 aaPredicted RBP18.62■□□□□ 0.57
PNKP-213ENST00000599543 MARK2Q7KZI7 788 aaKnown RBP18.62■□□□□ 0.57
PNKP-213ENST00000599543 GALNT13Q8IUC8 556 aa18.62■□□□□ 0.57
PNKP-213ENST00000599543 LRRC8AQ8IWT6 810 aa18.62■□□□□ 0.57
PNKP-213ENST00000599543 NRSN1Q8IZ57 195 aa18.62■□□□□ 0.57
PNKP-213ENST00000599543 NAGSQ8N159 534 aa18.62■□□□□ 0.57
PNKP-213ENST00000599543 EXD1Q8NHP7 514 aa18.62■□□□□ 0.57
PNKP-213ENST00000599543 LRRN4Q8WUT4 740 aa18.62■□□□□ 0.57
PNKP-213ENST00000599543 HDAC11Q96DB2 347 aa18.62■□□□□ 0.57
PNKP-213ENST00000599543 SCARF2Q96GP6 870 aaPredicted RBP18.62■□□□□ 0.57
PNKP-213ENST00000599543 NUDT22Q9BRQ3 303 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms