RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 SCG3Q8WXD2 468 aaKnown RBP23.23■■□□□ 1.31
SYMPK-212ENST00000598896 TCF12Q99081 682 aa23.23■■□□□ 1.31
SYMPK-212ENST00000598896 VPS11Q9H270 941 aa23.23■■□□□ 1.31
SYMPK-212ENST00000598896 GRID1Q9ULK0 1009 aa23.23■■□□□ 1.31
SYMPK-212ENST00000598896 AREL1O15033 823 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 OR1I1O60431 355 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 SYNCRIPO60506 623 aaKnown RBP23.22■■□□□ 1.31
SYMPK-212ENST00000598896 SHOX2O60902 331 aaPredicted RBP23.22■■□□□ 1.31
SYMPK-212ENST00000598896 KLF8O95600 359 aaPredicted RBP23.22■■□□□ 1.31
SYMPK-212ENST00000598896 ASMTLO95671 621 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 SLC35E2BP0CK96 405 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 NFKBIAP25963 317 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 DRD3P35462 400 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 P2RY2P41231 377 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 TTPAP49638 278 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 COPAP53621 1224 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 HECTD2Q5U5R9 776 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 LIPIQ6XZB0 460 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 ERN2Q76MJ5 926 aaKnown RBP23.22■■□□□ 1.31
SYMPK-212ENST00000598896 TAS2R42Q7RTR8 314 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 SNX20Q7Z614 316 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 KCNV2Q8TDN2 545 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 FAM3CQ92520 227 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 CCDC97Q96F63 343 aaPredicted RBP23.22■■□□□ 1.31
SYMPK-212ENST00000598896 ASB8Q9H765 288 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 DYRK4Q9NR20 520 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 LRRK1Q38SD2 2015 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 PLXNA2O75051 1894 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 A0A1W2PQF6 199 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 TM9SF1O15321 606 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 MID1O15344 667 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 GM2AP17900 193 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 UGT1A6P19224 532 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 UGT1A1P22309 533 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 UGT1A4P22310 534 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 CRHR1P34998 444 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 UGT1A3P35503 534 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 UGT1A5P35504 534 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 ETV4P43268 484 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 CDKN2DP55273 166 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 POU4F1Q01851 419 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 CNTN1Q12860 1018 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 CST6Q15828 149 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 PUS10Q3MIT2 529 aaKnown RBP23.22■■□□□ 1.31
SYMPK-212ENST00000598896 LVRNQ6Q4G3 990 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 Q6ZVL8 140 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 PLD6Q8N2A8 252 aaKnown RBP23.22■■□□□ 1.31
SYMPK-212ENST00000598896 AADATQ8N5Z0 425 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 GDAP1Q8TB36 358 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 PLEKHG4BQ96PX9 1271 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 FAM111AQ96PZ2 611 aa23.22■■□□□ 1.31
SYMPK-212ENST00000598896 WRAP53Q9BUR4 548 aaKnown RBP23.22■■□□□ 1.31
SYMPK-212ENST00000598896 MKRN2Q9H000 416 aaKnown RBP23.22■■□□□ 1.31
SYMPK-212ENST00000598896 MTF2Q9Y483 593 aaPredicted RBP23.22■■□□□ 1.31
SYMPK-212ENST00000598896 PLXNB3Q9ULL4 1909 aa23.21■■□□□ 1.31
SYMPK-212ENST00000598896 TRBV5-4A0A0C4DH59 114 aa23.21■■□□□ 1.31
SYMPK-212ENST00000598896 UBA6A0AVT1 1052 aaPredicted RBP23.21■■□□□ 1.31
SYMPK-212ENST00000598896 NDUFS3O75489 264 aa23.21■■□□□ 1.31
SYMPK-212ENST00000598896 STMN1P16949 149 aa23.21■■□□□ 1.31
SYMPK-212ENST00000598896 ITGALP20701 1170 aa23.21■■□□□ 1.31
SYMPK-212ENST00000598896 COL9A1P20849 921 aa23.21■■□□□ 1.31
SYMPK-212ENST00000598896 ETV3P41162 512 aa23.21■■□□□ 1.31
SYMPK-212ENST00000598896 CCT5P48643 541 aa23.21■■□□□ 1.31
SYMPK-212ENST00000598896 POLD2P49005 469 aa23.21■■□□□ 1.31
SYMPK-212ENST00000598896 RAB10P61026 200 aa23.21■■□□□ 1.31
SYMPK-212ENST00000598896 CCINQ13939 588 aa23.21■■□□□ 1.31
SYMPK-212ENST00000598896 AARS2Q5JTZ9 985 aaKnown RBP23.21■■□□□ 1.31
SYMPK-212ENST00000598896 CENPTQ96BT3 561 aa23.21■■□□□ 1.31
SYMPK-212ENST00000598896 HDAC8Q9BY41 377 aa23.21■■□□□ 1.31
SYMPK-212ENST00000598896 PKD2L2Q9NZM6 624 aa23.21■■□□□ 1.31
SYMPK-212ENST00000598896 FAM50BQ9Y247 325 aa23.21■■□□□ 1.31
SYMPK-212ENST00000598896 PLLPQ9Y342 182 aa23.21■■□□□ 1.31
SYMPK-212ENST00000598896 AGAP14A8MT82 685 aa23.2■■□□□ 1.3
SYMPK-212ENST00000598896 MPOP05164 745 aa23.2■■□□□ 1.3
SYMPK-212ENST00000598896 ELFN1P0C7U0 828 aa23.2■■□□□ 1.3
SYMPK-212ENST00000598896 HOXB2P14652 356 aa23.2■■□□□ 1.3
SYMPK-212ENST00000598896 LSP1P33241 339 aa23.2■■□□□ 1.3
SYMPK-212ENST00000598896 PTPN5P54829 565 aa23.2■■□□□ 1.3
SYMPK-212ENST00000598896 DBN1Q16643 649 aa23.2■■□□□ 1.3
SYMPK-212ENST00000598896 PIP5KL1Q5T9C9 394 aa23.2■■□□□ 1.3
SYMPK-212ENST00000598896 FAM46CQ5VWP2 391 aa23.2■■□□□ 1.3
SYMPK-212ENST00000598896 RAPH1Q70E73 1250 aa23.2■■□□□ 1.3
SYMPK-212ENST00000598896 CLEC14AQ86T13 490 aa23.2■■□□□ 1.3
SYMPK-212ENST00000598896 SERPINA9Q86WD7 417 aa23.2■■□□□ 1.3
SYMPK-212ENST00000598896 ZNF398Q8TD17 642 aa23.2■■□□□ 1.3
SYMPK-212ENST00000598896 SCAMP4Q969E2 229 aa23.2■■□□□ 1.3
SYMPK-212ENST00000598896 BIRC8Q96P09 236 aa23.2■■□□□ 1.3
SYMPK-212ENST00000598896 IQCGQ9H095 443 aaKnown RBP23.2■■□□□ 1.3
SYMPK-212ENST00000598896 CD248Q9HCU0 757 aa23.2■■□□□ 1.3
SYMPK-212ENST00000598896 ZNF358Q9NW07 568 aa23.2■■□□□ 1.3
SYMPK-212ENST00000598896 DUSP12Q9UNI6 340 aa23.2■■□□□ 1.3
SYMPK-212ENST00000598896 VWA7Q9Y334 891 aa23.2■■□□□ 1.3
SYMPK-212ENST00000598896 DNAJC6O75061 913 aa23.19■■□□□ 1.3
SYMPK-212ENST00000598896 LIG3P49916 1009 aa23.19■■□□□ 1.3
SYMPK-212ENST00000598896 TIAL1Q01085 375 aaKnown RBP eCLIP23.19■■□□□ 1.3
SYMPK-212ENST00000598896 ELP6Q0PNE2 266 aa23.19■■□□□ 1.3
SYMPK-212ENST00000598896 ATP13A5Q4VNC0 1218 aa23.19■■□□□ 1.3
SYMPK-212ENST00000598896 RNF187Q5TA31 235 aaPredicted RBP23.19■■□□□ 1.3
SYMPK-212ENST00000598896 SDE2Q6IQ49 451 aa23.19■■□□□ 1.3
SYMPK-212ENST00000598896 PIM3Q86V86 326 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms