RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 PGBD3Q8N328 593 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 GPR26Q8NDV2 337 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 TSTD1Q8NFU3 115 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 DTX3LQ8TDB6 740 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 HMGB4Q8WW32 186 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 FAM131CQ96AQ9 280 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 ULK4Q96C45 1275 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 ATP6V1G3Q96LB4 118 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 SLC6A17Q9H1V8 727 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 CHRDQ9H2X0 955 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 RHOJQ9H4E5 214 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 FAM83DQ9H4H8 585 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 ASB8Q9H765 288 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 UGT1A7Q9HAW7 530 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 UGT1A10Q9HAW8 530 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 UGT1A8Q9HAW9 530 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 IL26Q9NPH9 171 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 EURLQ9NYK6 297 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 SENP1Q9P0U3 644 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 CRLS1Q9UJA2 301 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 CORO1CQ9ULV4 474 aaPredicted RBP15.39■□□□□ 0.05
UPF1-206ENST00000598471 PSAT1Q9Y617 370 aa15.39■□□□□ 0.05
UPF1-206ENST00000598471 PLRG1O43660 514 aaKnown RBP15.38■□□□□ 0.05
UPF1-206ENST00000598471 MMP20O60882 483 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 NDUFS3O75489 264 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 FAM155BO75949 473 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 C6P13671 934 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 GABRG2P18507 467 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 ETV3P41162 512 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 MAGEA9P43362 315 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 RPS9P46781 194 aaKnown RBP15.38■□□□□ 0.05
UPF1-206ENST00000598471 LEPRP48357 1165 aaKnown RBP15.38■□□□□ 0.05
UPF1-206ENST00000598471 CLCN5P51795 746 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 LIMK2P53671 638 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 DNAJC3Q13217 504 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 NFATC2Q13469 925 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 CHRNA6Q15825 494 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 TYSND1Q2T9J0 566 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 KIAA1161Q6NSJ0 714 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 Q6ZVL8 140 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 SPEM1Q8N4L4 309 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 OR14C36Q8NHC7 312 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 ZNF398Q8TD17 642 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 CLDN23Q96B33 292 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 ARL8AQ96BM9 186 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 NUS1Q96E22 293 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 DTD2Q96FN9 168 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 COQ10AQ96MF6 247 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 ZSCAN5AQ9BUG6 496 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 KDM4CQ9H3R0 1056 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 PREBQ9HCU5 417 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 C11orf16Q9NQ32 467 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 FBXO6Q9NRD1 293 aaPredicted RBP15.38■□□□□ 0.05
UPF1-206ENST00000598471 MARCH4Q9P2E8 410 aaPredicted RBP15.38■□□□□ 0.05
UPF1-206ENST00000598471 SERGEFQ9UGK8 458 aa15.38■□□□□ 0.05
UPF1-206ENST00000598471 TTC28Q96AY4 2481 aa15.37■□□□□ 0.05
UPF1-206ENST00000598471 FAM86C2PA6NEL3 165 aa15.37■□□□□ 0.05
UPF1-206ENST00000598471 TRIM49D1C9J1S8 452 aa15.37■□□□□ 0.05
UPF1-206ENST00000598471 TM7SF2O76062 418 aa15.37■□□□□ 0.05
UPF1-206ENST00000598471 MT-ND3P03897 115 aa15.37■□□□□ 0.05
UPF1-206ENST00000598471 ITGA2BP08514 1039 aa15.37■□□□□ 0.05
UPF1-206ENST00000598471 POLD2P49005 469 aa15.37■□□□□ 0.05
UPF1-206ENST00000598471 TAS2R38P59533 333 aa15.37■□□□□ 0.05
UPF1-206ENST00000598471 MPP1Q00013 466 aa15.37■□□□□ 0.05
UPF1-206ENST00000598471 SIGLEC14Q08ET2 396 aa15.37■□□□□ 0.05
UPF1-206ENST00000598471 FZD5Q13467 585 aa15.37■□□□□ 0.05
UPF1-206ENST00000598471 NEK5Q6P3R8 708 aa15.37■□□□□ 0.05
UPF1-206ENST00000598471 TECPR1Q7Z6L1 1165 aa15.37■□□□□ 0.05
UPF1-206ENST00000598471 ZC3HC1Q86WB0 502 aaKnown RBP15.37■□□□□ 0.05
UPF1-206ENST00000598471 TRAM1L1Q8N609 369 aa15.37■□□□□ 0.05
UPF1-206ENST00000598471 AP2M1Q96CW1 435 aa15.37■□□□□ 0.05
UPF1-206ENST00000598471 VPS39Q96JC1 886 aa15.37■□□□□ 0.05
UPF1-206ENST00000598471 SPATA16Q9BXB7 569 aa15.37■□□□□ 0.05
UPF1-206ENST00000598471 CCDC68Q9H2F9 335 aa15.37■□□□□ 0.05
UPF1-206ENST00000598471 NOVA2Q9UNW9 492 aaKnown RBP15.37■□□□□ 0.05
UPF1-206ENST00000598471 SIT1Q9Y3P8 196 aa15.37■□□□□ 0.05
UPF1-206ENST00000598471 TMEM221A6NGB7 291 aa15.36■□□□□ 0.05
UPF1-206ENST00000598471 LRRC72A6NJI9 287 aa15.36■□□□□ 0.05
UPF1-206ENST00000598471 M0R296 226 aa15.36■□□□□ 0.05
UPF1-206ENST00000598471 GAPDHSO14556 408 aaPredicted RBP15.36■□□□□ 0.05
UPF1-206ENST00000598471 RECQL5O94762 991 aaPredicted RBP15.36■□□□□ 0.05
UPF1-206ENST00000598471 APBB3O95704 486 aa15.36■□□□□ 0.05
UPF1-206ENST00000598471 S1PR4O95977 384 aa15.36■□□□□ 0.05
UPF1-206ENST00000598471 PDGFBP01127 241 aaPredicted RBP15.36■□□□□ 0.05
UPF1-206ENST00000598471 AHSGP02765 367 aa15.36■□□□□ 0.05
UPF1-206ENST00000598471 PYGLP06737 847 aa15.36■□□□□ 0.05
UPF1-206ENST00000598471 SERPINB8P50452 374 aa15.36■□□□□ 0.05
UPF1-206ENST00000598471 ADPRHP54922 357 aa15.36■□□□□ 0.05
UPF1-206ENST00000598471 RPS21P63220 83 aaKnown RBP15.36■□□□□ 0.05
UPF1-206ENST00000598471 CREB5Q02930 508 aa15.36■□□□□ 0.05
UPF1-206ENST00000598471 BMPR2Q13873 1038 aa15.36■□□□□ 0.05
UPF1-206ENST00000598471 SETMARQ53H47 684 aaPredicted RBP15.36■□□□□ 0.05
UPF1-206ENST00000598471 TTMPQ5BVD1 217 aa15.36■□□□□ 0.05
UPF1-206ENST00000598471 HENMT1Q5T8I9 393 aaKnown RBP15.36■□□□□ 0.05
UPF1-206ENST00000598471 MROH9Q5TGP6 573 aa15.36■□□□□ 0.05
UPF1-206ENST00000598471 KCTD16Q68DU8 428 aa15.36■□□□□ 0.05
UPF1-206ENST00000598471 ANO7Q6IWH7 933 aa15.36■□□□□ 0.05
UPF1-206ENST00000598471 PSAPL1Q6NUJ1 521 aa15.36■□□□□ 0.05
UPF1-206ENST00000598471 LDB1Q86U70 411 aaPredicted RBP15.36■□□□□ 0.05
UPF1-206ENST00000598471 TLCD1Q96CP7 247 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms