RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 TDRD1Q9BXT4 1180 aaKnown RBP20.36■□□□□ 0.85
TRIM47-207ENST00000593089 CAPN11Q9UMQ6 739 aa20.36■□□□□ 0.85
TRIM47-207ENST00000593089 TRBV23OR9-2A0A075B6M9 112 aa20.35■□□□□ 0.85
TRIM47-207ENST00000593089 SYCE3A1L190 88 aa20.35■□□□□ 0.85
TRIM47-207ENST00000593089 PYCARD-AS1I3L0S3 204 aa20.35■□□□□ 0.85
TRIM47-207ENST00000593089 HGSO14964 777 aaPredicted RBP20.35■□□□□ 0.85
TRIM47-207ENST00000593089 CCNCP24863 283 aa20.35■□□□□ 0.85
TRIM47-207ENST00000593089 MPSTP25325 297 aa20.35■□□□□ 0.85
TRIM47-207ENST00000593089 PPM1FP49593 454 aaPredicted RBP20.35■□□□□ 0.85
TRIM47-207ENST00000593089 STC1P52823 247 aa20.35■□□□□ 0.85
TRIM47-207ENST00000593089 ALG1LQ6GMV1 187 aa20.35■□□□□ 0.85
TRIM47-207ENST00000593089 GALNT13Q8IUC8 556 aa20.35■□□□□ 0.85
TRIM47-207ENST00000593089 EXD3Q8N9H8 876 aa20.35■□□□□ 0.85
TRIM47-207ENST00000593089 LPCAT1Q8NF37 534 aa20.35■□□□□ 0.85
TRIM47-207ENST00000593089 JPH3Q8WXH2 748 aaPredicted RBP20.35■□□□□ 0.85
TRIM47-207ENST00000593089 ARHGAP9Q9BRR9 750 aa20.35■□□□□ 0.85
TRIM47-207ENST00000593089 ZMYND15Q9H091 742 aa20.35■□□□□ 0.85
TRIM47-207ENST00000593089 KCNK4Q9NYG8 393 aa20.35■□□□□ 0.85
TRIM47-207ENST00000593089 CTTNBP2NLQ9P2B4 639 aa20.35■□□□□ 0.85
TRIM47-207ENST00000593089 LUC7L2Q9Y383 392 aaKnown RBP20.35■□□□□ 0.85
TRIM47-207ENST00000593089 PCDHGA4Q9Y5G9 962 aa20.35■□□□□ 0.85
TRIM47-207ENST00000593089 SDK2Q58EX2 2172 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 IGHV1OR21-1A0A087WYE8 117 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 CLDN7O95471 211 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 HLA-DQB2P05538 268 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 PYGLP06737 847 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 FGF3P11487 239 aaPredicted RBP20.34■□□□□ 0.85
TRIM47-207ENST00000593089 CES1P23141 567 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 CD82P27701 267 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 LIMK2P53671 638 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 NIPAL4Q0D2K0 466 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 NLRP8Q86W28 1048 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 ZNF761Q86XN6 746 aaPredicted RBP20.34■□□□□ 0.85
TRIM47-207ENST00000593089 ZSCAN1Q8NBB4 408 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 EXD1Q8NHP7 514 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 ARRDC2Q8TBH0 407 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 PMEPA1Q969W9 287 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 ZNF670Q9BS34 389 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 PCDH9Q9HC56 1237 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 HAUS2Q9NVX0 235 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 TMEM9Q9P0T7 183 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 DNPEPQ9ULA0 475 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 PRKAB1Q9Y478 270 aa20.34■□□□□ 0.85
TRIM47-207ENST00000593089 SLC28A2O43868 658 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 PROSCO94903 275 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 PRLP01236 227 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 GYPCP04921 128 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 ATP1A1P05023 1023 aaKnown RBP20.33■□□□□ 0.85
TRIM47-207ENST00000593089 WT1P19544 449 aaPredicted RBP20.33■□□□□ 0.85
TRIM47-207ENST00000593089 CA4P22748 312 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 CSF2RBP32927 897 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 TAS2R40P59535 323 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 GBE1Q04446 702 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 NFATC3Q12968 1075 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 TRA2AQ13595 282 aaKnown RBP eCLIP20.33■□□□□ 0.85
TRIM47-207ENST00000593089 PDK2Q15119 407 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 ZFYVE27Q5T4F4 411 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 NRSN1Q8IZ57 195 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 OR4D9Q8NGE8 314 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 IQCDQ96DY2 449 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 COX14Q96I36 57 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 TSGA13Q96PP4 275 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 TAAR9Q96RI9 348 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 B3GNT4Q9C0J1 378 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 AMACRQ9UHK6 382 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 ZNHIT2Q9UHR6 403 aa20.33■□□□□ 0.85
TRIM47-207ENST00000593089 PCYT1BQ9Y5K3 369 aaPredicted RBP20.33■□□□□ 0.85
TRIM47-207ENST00000593089 PIEZO2Q9H5I5 2752 aa20.32■□□□□ 0.84
TRIM47-207ENST00000593089 EML2O95834 649 aa20.32■□□□□ 0.84
TRIM47-207ENST00000593089 ITGB2P05107 769 aa20.32■□□□□ 0.84
TRIM47-207ENST00000593089 THRAP10827 490 aa20.32■□□□□ 0.84
TRIM47-207ENST00000593089 CSTF2P33240 577 aaKnown RBP eCLIP20.32■□□□□ 0.84
TRIM47-207ENST00000593089 CYP4F2P78329 520 aa20.32■□□□□ 0.84
TRIM47-207ENST00000593089 LRP8Q14114 963 aa20.32■□□□□ 0.84
TRIM47-207ENST00000593089 CHST15Q7LFX5 561 aaPredicted RBP20.32■□□□□ 0.84
TRIM47-207ENST00000593089 MAP7D3Q8IWC1 876 aa20.32■□□□□ 0.84
TRIM47-207ENST00000593089 PQLC3Q8N755 202 aa20.32■□□□□ 0.84
TRIM47-207ENST00000593089 CCNYQ8ND76 341 aa20.32■□□□□ 0.84
TRIM47-207ENST00000593089 AGBL5Q8NDL9 886 aa20.32■□□□□ 0.84
TRIM47-207ENST00000593089 SLC37A2Q8TED4 501 aa20.32■□□□□ 0.84
TRIM47-207ENST00000593089 FATE1Q969F0 183 aa20.32■□□□□ 0.84
TRIM47-207ENST00000593089 AHCYL2Q96HN2 611 aaKnown RBP20.32■□□□□ 0.84
TRIM47-207ENST00000593089 SLC38A3Q99624 504 aa20.32■□□□□ 0.84
TRIM47-207ENST00000593089 NENFQ9UMX5 172 aa20.32■□□□□ 0.84
TRIM47-207ENST00000593089 OAS3Q9Y6K5 1087 aaKnown RBP20.32■□□□□ 0.84
TRIM47-207ENST00000593089 C1orf232A0A0U1RR37 186 aa20.31■□□□□ 0.84
TRIM47-207ENST00000593089 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.31■□□□□ 0.84
TRIM47-207ENST00000593089 GOLGA6L19H0YKK7 550 aa20.31■□□□□ 0.84
TRIM47-207ENST00000593089 STMND1H3BQB6 276 aa20.31■□□□□ 0.84
TRIM47-207ENST00000593089 DNAJC6O75061 913 aa20.31■□□□□ 0.84
TRIM47-207ENST00000593089 KRT7P08729 469 aa20.31■□□□□ 0.84
TRIM47-207ENST00000593089 MX2P20592 715 aa20.31■□□□□ 0.84
TRIM47-207ENST00000593089 CASP14P31944 242 aa20.31■□□□□ 0.84
TRIM47-207ENST00000593089 ARSDP51689 593 aa20.31■□□□□ 0.84
TRIM47-207ENST00000593089 RPL26P61254 145 aaKnown RBP20.31■□□□□ 0.84
TRIM47-207ENST00000593089 SLC10A2Q12908 348 aaPredicted RBP20.31■□□□□ 0.84
TRIM47-207ENST00000593089 SQSTM1Q13501 440 aa20.31■□□□□ 0.84
TRIM47-207ENST00000593089 PRICKLE2Q7Z3G6 844 aa20.31■□□□□ 0.84
TRIM47-207ENST00000593089 CCDC13Q8IYE1 715 aa20.31■□□□□ 0.84
TRIM47-207ENST00000593089 CCDC112Q8NEF3 446 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms