RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 MFSD3Q96ES6 412 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 C9orf72Q96LT7 481 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 COQ10AQ96MF6 247 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 CAMK1GQ96NX5 476 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 LYSMD1Q96S90 227 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 GPR63Q9BZJ6 419 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 GAREM1Q9H706 876 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 ZFYVE1Q9HBF4 777 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 LRRC4CQ9HCJ2 640 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 XAB2Q9HCS7 855 aaKnown RBP9.62□□□□□ -0.87
DDX39A-220ENST00000593008 ARFGAP3Q9NP61 516 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 MBNL1Q9NR56 388 aaKnown RBP9.62□□□□□ -0.87
DDX39A-220ENST00000593008 FAM114A2Q9NRY5 505 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 GOLGA6AQ9NYA3 693 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 RPL26L1Q9UNX3 145 aaKnown RBP9.62□□□□□ -0.87
DDX39A-220ENST00000593008 ANKRD6Q9Y2G4 727 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 MAD1L1Q9Y6D9 718 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 CEP192Q8TEP8 1941 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 PLXNA2O75051 1894 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 MROH6A6NGR9 719 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 FADS2P1A8MWK0 482 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 E7ESA3 106 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 H0Y8X5 98 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 SLC31A1O15431 190 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 PSMD3O43242 534 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 RECQL5O94762 991 aaPredicted RBP9.61□□□□□ -0.87
DDX39A-220ENST00000593008 SOD1P00441 154 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 WNT1P04628 370 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 PCCBP05166 539 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 CYP2A6P11509 494 aaPredicted RBP9.61□□□□□ -0.87
DDX39A-220ENST00000593008 IGFALSP35858 605 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 CDKN1CP49918 316 aaPredicted RBP9.61□□□□□ -0.87
DDX39A-220ENST00000593008 C21orf59P57076 290 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 CLDN2P57739 230 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 RACK1P63244 317 aaKnown RBP9.61□□□□□ -0.87
DDX39A-220ENST00000593008 IL9RQ01113 521 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 SEMA3AQ14563 771 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 EFTUD2Q15029 972 aaKnown RBP eCLIP9.61□□□□□ -0.872e-7■■■■□ 20.5
DDX39A-220ENST00000593008 IRF4Q15306 451 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 N4BP2L1Q5TBK1 243 aaPredicted RBP9.61□□□□□ -0.87
DDX39A-220ENST00000593008 FAM151BQ6UXP7 276 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 UNC5AQ6ZN44 842 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 TMC3Q7Z5M5 1100 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 TECPR1Q7Z6L1 1165 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 LINC00523Q86TU6 105 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 LDB1Q86U70 411 aaPredicted RBP9.61□□□□□ -0.87
DDX39A-220ENST00000593008 TRIM74Q86UV6 250 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 HORMAD1Q86X24 394 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 IFT20Q8IY31 132 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 ZBED8Q8IZ13 594 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 CBARPQ8N350 705 aaPredicted RBP9.61□□□□□ -0.87
DDX39A-220ENST00000593008 FBXO36Q8NEA4 188 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 PPHLN1Q8NEY8 458 aaKnown RBP9.61□□□□□ -0.87
DDX39A-220ENST00000593008 UHMK1Q8TAS1 419 aaKnown RBP9.61□□□□□ -0.87
DDX39A-220ENST00000593008 HCAR2Q8TDS4 363 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 CXorf40AQ8TE69 158 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 PTCD2Q8WV60 388 aaKnown RBP9.61□□□□□ -0.87
DDX39A-220ENST00000593008 STAMBPL1Q96FJ0 436 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 TBATAQ96M53 351 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 PPP1R2P1Q96PQ5 205 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 RIOK2Q9BVS4 552 aaKnown RBP9.61□□□□□ -0.87
DDX39A-220ENST00000593008 PARD6BQ9BYG5 372 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 ZDHHC5Q9C0B5 715 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 PREBQ9HCU5 417 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 DNAAF2Q9NVR5 837 aaKnown RBP9.61□□□□□ -0.87
DDX39A-220ENST00000593008 NINJ2Q9NZG7 142 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 IL17CQ9P0M4 197 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 MARCH4Q9P2E8 410 aaPredicted RBP9.61□□□□□ -0.87
DDX39A-220ENST00000593008 TMPRSS11EQ9UL52 423 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 TEX264Q9Y6I9 313 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 PCDH15Q96QU1 1955 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 PI4KAP42356 2102 aa9.61□□□□□ -0.87
DDX39A-220ENST00000593008 ADAMTS9Q9P2N4 1935 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 ZCWPW2A0A1B0GU75 182 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 SPAARA0A1B0GVQ0 90 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 CCDC162PA2VCL2 907 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 LATO43561 262 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 AP1G1O43747 822 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 SH3BP5O60239 455 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 LZTS3O60299 673 aaPredicted RBP9.6□□□□□ -0.87
DDX39A-220ENST00000593008 CER1O95813 267 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 PAK4O96013 591 aaPredicted RBP9.6□□□□□ -0.87
DDX39A-220ENST00000593008 MLNP12872 115 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 CD59P13987 128 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 CD38P28907 300 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 SSTR1P30872 391 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 TNNT3P45378 269 aaPredicted RBP9.6□□□□□ -0.87
DDX39A-220ENST00000593008 ABCG1P45844 678 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 DRG2P55039 364 aaKnown RBP9.6□□□□□ -0.87
DDX39A-220ENST00000593008 ARL4CP56559 192 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 GPX6P59796 221 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 POLR2LP62875 67 aaKnown RBP9.6□□□□□ -0.87
DDX39A-220ENST00000593008 XIAPP98170 497 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 CDK16Q00536 496 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 ELP6Q0PNE2 266 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 PEX6Q13608 980 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 CUL1Q13616 776 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 ARHGEF7Q14155 803 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 CRYMQ14894 314 aa9.6□□□□□ -0.87
DDX39A-220ENST00000593008 TAF1AQ15573 450 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms