RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 LIPIQ6XZB0 460 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 CERS6Q6ZMG9 384 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 TAS2R42Q7RTR8 314 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 CMC1Q7Z7K0 106 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 GPATCH11Q8N954 259 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 ZMYND15Q9H091 742 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 ASB8Q9H765 288 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 CAB39LQ9H9S4 337 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 MKS1Q9NXB0 559 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 SORCS3Q9UPU3 1222 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 ZNF106Q9H2Y7 1883 aaKnown RBP17.36■□□□□ 0.37
CXXC1-212ENST00000589940 RGSL1A5PLK6 1076 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 COPEO14579 308 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 GPR39O43194 453 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 RRP9O43818 475 aaKnown RBP17.36■□□□□ 0.37
CXXC1-212ENST00000589940 NDUFS3O75489 264 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 CHN1P15882 459 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 DRD3P35462 400 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 DCDC1P59894 354 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 RPS14P62263 151 aaKnown RBP17.36■□□□□ 0.37
CXXC1-212ENST00000589940 POU4F1Q01851 419 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 PDE1CQ14123 709 aaPredicted RBP17.36■□□□□ 0.37
CXXC1-212ENST00000589940 CHRNA6Q15825 494 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 GPR33Q49SQ1 333 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 ZNF852Q6ZMS4 543 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 RFLNAQ6ZTI6 216 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 CACUL1Q86Y37 369 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 RPLP0P6Q8NHW5 317 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 LPGAT1Q92604 370 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 ELMO2Q96JJ3 720 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 MKRN2Q9H000 416 aaKnown RBP17.36■□□□□ 0.37
CXXC1-212ENST00000589940 RAD18Q9NS91 495 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 NKIRAS1Q9NYS0 192 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 CRYL1Q9Y2S2 319 aa17.36■□□□□ 0.37
CXXC1-212ENST00000589940 ATG2BQ96BY7 2078 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 RPA3P35244 121 aaPredicted RBP17.35■□□□□ 0.37
CXXC1-212ENST00000589940 LIG3P49916 1009 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 RBM20Q5T481 1227 aaKnown RBP17.35■□□□□ 0.37
CXXC1-212ENST00000589940 PIP5KL1Q5T9C9 394 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 SLC41A1Q8IVJ1 513 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 RAVER1Q8IY67 606 aaKnown RBP17.35■□□□□ 0.37
CXXC1-212ENST00000589940 AADATQ8N5Z0 425 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 ANKRD42Q8N9B4 389 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 ZNF398Q8TD17 642 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 CABS1Q96KC9 395 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 OMDQ99983 421 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 WRAP53Q9BUR4 548 aaKnown RBP17.35■□□□□ 0.37
CXXC1-212ENST00000589940 SLC13A1Q9BZW2 595 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 CDH19Q9H159 772 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 CD248Q9HCU0 757 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 NFKBIL1Q9UBC1 381 aaPredicted RBP17.35■□□□□ 0.37
CXXC1-212ENST00000589940 NDRG2Q9UN36 371 aaKnown RBP17.35■□□□□ 0.37
CXXC1-212ENST00000589940 TRBV5-4A0A0C4DH59 114 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 GOLGA8CPA6NN73 597 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 NEMP1O14524 444 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 MPOP05164 745 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 COL9A1P20849 921 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 SAT1P21673 171 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 ETV3P41162 512 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 CSRP3P50461 194 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 PRKCQQ04759 706 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 EOGTQ5NDL2 527 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 Q6ZVL8 140 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 NDNQ99608 321 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 FAM83DQ9H4H8 585 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 ARHGEF3Q9NR81 526 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 THEGQ9P2T0 379 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 CA14Q9ULX7 337 aa17.35■□□□□ 0.37
CXXC1-212ENST00000589940 AGAP14A8MT82 685 aa17.34■□□□□ 0.37
CXXC1-212ENST00000589940 ZWINTO95229 277 aa17.34■□□□□ 0.37
CXXC1-212ENST00000589940 STMN1P16949 149 aa17.34■□□□□ 0.37
CXXC1-212ENST00000589940 PPARGP37231 505 aaPredicted RBP17.34■□□□□ 0.37
CXXC1-212ENST00000589940 MDH1P40925 334 aaKnown RBP17.34■□□□□ 0.37
CXXC1-212ENST00000589940 CCT5P48643 541 aa17.34■□□□□ 0.37
CXXC1-212ENST00000589940 CCDC15Q0P6D6 951 aa17.34■□□□□ 0.37
CXXC1-212ENST00000589940 ZKSCAN8Q15776 578 aaPredicted RBP17.34■□□□□ 0.37
CXXC1-212ENST00000589940 TMEM52BQ4KMG9 183 aa17.34■□□□□ 0.37
CXXC1-212ENST00000589940 PPM1JQ5JR12 505 aa17.34■□□□□ 0.37
CXXC1-212ENST00000589940 HECTD2Q5U5R9 776 aa17.34■□□□□ 0.37
CXXC1-212ENST00000589940 AGBL4Q5VU57 503 aa17.34■□□□□ 0.37
CXXC1-212ENST00000589940 TECPR1Q7Z6L1 1165 aa17.34■□□□□ 0.37
CXXC1-212ENST00000589940 SERPINA9Q86WD7 417 aa17.34■□□□□ 0.37
CXXC1-212ENST00000589940 DTX3LQ8TDB6 740 aa17.34■□□□□ 0.37
CXXC1-212ENST00000589940 TCP10LQ8TDR4 215 aa17.34■□□□□ 0.37
CXXC1-212ENST00000589940 DENND1AQ8TEH3 1009 aa17.34■□□□□ 0.37
CXXC1-212ENST00000589940 TTC1Q99614 292 aa17.34■□□□□ 0.37
CXXC1-212ENST00000589940 INTS9Q9NV88 658 aaKnown RBP17.34■□□□□ 0.37
CXXC1-212ENST00000589940 CD84Q9UIB8 345 aa17.34■□□□□ 0.37
CXXC1-212ENST00000589940 FADS3Q9Y5Q0 445 aa17.34■□□□□ 0.37
CXXC1-212ENST00000589940 A0A096LPK6 155 aa17.33■□□□□ 0.37
CXXC1-212ENST00000589940 UBA6A0AVT1 1052 aaPredicted RBP17.33■□□□□ 0.37
CXXC1-212ENST00000589940 TM9SF1O15321 606 aa17.33■□□□□ 0.37
CXXC1-212ENST00000589940 C2P06681 752 aa17.33■□□□□ 0.37
CXXC1-212ENST00000589940 UGT1A6P19224 532 aa17.33■□□□□ 0.37
CXXC1-212ENST00000589940 UGT1A1P22309 533 aa17.33■□□□□ 0.37
CXXC1-212ENST00000589940 UGT1A4P22310 534 aa17.33■□□□□ 0.37
CXXC1-212ENST00000589940 CRABP2P29373 138 aa17.33■□□□□ 0.37
CXXC1-212ENST00000589940 CRHR1P34998 444 aa17.33■□□□□ 0.37
CXXC1-212ENST00000589940 UGT1A3P35503 534 aa17.33■□□□□ 0.37
CXXC1-212ENST00000589940 UGT1A5P35504 534 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms